RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 I3L4J1 428 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 KHNYNO15037 678 aaKnown RBP8.98□□□□□ -0.97
SCARB2-226ENST00000640916 ZBTB39O15060 712 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 ASAP2O43150 1006 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 RHOBTB1O94844 696 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 GSPT1P15170 499 aaKnown RBP8.98□□□□□ -0.97
SCARB2-226ENST00000640916 CDC27P30260 824 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 PSMC5P62195 406 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 SEMA3BQ13214 749 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 PCBP1Q15365 356 aaKnown RBP eCLIP8.98□□□□□ -0.97
SCARB2-226ENST00000640916 UAP1L1Q3KQV9 507 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 TMEM196Q5HYL7 178 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 STXBP5Q5T5C0 1151 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 PMS2CLQ68D20 193 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 APOA5Q6Q788 366 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 PDZD4Q76G19 769 aaPredicted RBP8.98□□□□□ -0.97
SCARB2-226ENST00000640916 CHD1LQ86WJ1 897 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 LURAP1LQ8IV03 231 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 REXO1Q8N1G1 1221 aaKnown RBP8.98□□□□□ -0.97
SCARB2-226ENST00000640916 CAMKK1Q8N5S9 505 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 ETNPPLQ8TBG4 499 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 SLC7A3Q8WY07 619 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 CRELD1Q96HD1 420 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 LRIG1Q96JA1 1093 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 HHIPQ96QV1 700 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 RBM8AQ9Y5S9 174 aaKnown RBP8.98□□□□□ -0.97
SCARB2-226ENST00000640916 URB1O60287 2271 aaKnown RBP8.98□□□□□ -0.97
SCARB2-226ENST00000640916 DENND4CQ5VZ89 1909 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 PCDH15Q96QU1 1955 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 UPK3BL1B0FP48 263 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 UPK3BL2E5RIL1 263 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 INO80B-WBP1J3KQ70 363 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 PRRG1O14668 218 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 PLA2G2AP14555 144 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 CHMLP26374 656 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 RFC5P40937 340 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 BRCC3P46736 316 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 USP11P51784 963 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 SIM1P81133 766 aaPredicted RBP8.97□□□□□ -0.97
SCARB2-226ENST00000640916 NUCB1Q02818 461 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 POU5F1BQ06416 359 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 CAPSQ13938 189 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 MRPL58Q14197 206 aaKnown RBP8.97□□□□□ -0.97
SCARB2-226ENST00000640916 EMC2Q15006 297 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 ELF2Q15723 593 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 Q4G0T1 1027 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 CYP4A22Q5TCH4 519 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 LARP1BQ659C4 914 aaKnown RBP8.97□□□□□ -0.97
SCARB2-226ENST00000640916 SLC27A1Q6PCB7 646 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 ANKS3Q6ZW76 656 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 TMC8Q8IU68 726 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 ARID3BQ8IVW6 561 aaPredicted RBP8.97□□□□□ -0.97
SCARB2-226ENST00000640916 ASAP3Q8TDY4 903 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 E2F7Q96AV8 911 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 CEP170P1Q96L14 293 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 TMEM209Q96SK2 561 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 TRIM6Q9C030 488 aaPredicted RBP8.97□□□□□ -0.97
SCARB2-226ENST00000640916 FBRSL1Q9HCM7 1045 aaKnown RBP8.97□□□□□ -0.97
SCARB2-226ENST00000640916 RBM28Q9NW13 759 aaKnown RBP8.97□□□□□ -0.97
SCARB2-226ENST00000640916 EBF1Q9UH73 591 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 SLC8A2Q9UPR5 921 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 INVSQ9Y283 1065 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 CEP192Q8TEP8 1941 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 GON4LQ3T8J9 2241 aa8.97□□□□□ -0.97
SCARB2-226ENST00000640916 CYP3A7-CYP3A51PA0A087WV96 503 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 OTOL1A6NHN0 477 aaPredicted RBP8.96□□□□□ -0.98
SCARB2-226ENST00000640916 SGSM2O43147 1006 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 VNN2O95498 520 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 TDP2O95551 362 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 EGFP01133 1207 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 PRKCBP05771 671 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 THP07101 528 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 MYL4P12829 197 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 BCKDHBP21953 392 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 CYP3A7P24462 503 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 QARSP47897 775 aaKnown RBP8.96□□□□□ -0.98
SCARB2-226ENST00000640916 CLCNKBP51801 687 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 C19orf57Q0VDD7 668 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 TWF1Q12792 350 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 RTN1Q16799 776 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 UPP1Q16831 310 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
SCARB2-226ENST00000640916 THSD4Q6ZMP0 1018 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 HACE1Q8IYU2 909 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 DAGLBQ8NCG7 672 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 MDM1Q8TC05 714 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 EZH1Q92800 747 aaPredicted RBP8.96□□□□□ -0.98
SCARB2-226ENST00000640916 CYP4F11Q9HBI6 524 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 EVLQ9UI08 416 aaPredicted RBP8.96□□□□□ -0.98
SCARB2-226ENST00000640916 RAXQ9Y2V3 346 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 PPME1Q9Y570 386 aa8.96□□□□□ -0.98
SCARB2-226ENST00000640916 HELZP42694 1942 aaKnown RBP8.95□□□□□ -0.98
SCARB2-226ENST00000640916 PLXND1Q9Y4D7 1925 aa8.95□□□□□ -0.98
SCARB2-226ENST00000640916 A0A1W2PRU2 124 aa8.95□□□□□ -0.98
SCARB2-226ENST00000640916 H0Y626 953 aa8.95□□□□□ -0.98
SCARB2-226ENST00000640916 TRDMT1O14717 391 aaKnown RBP8.95□□□□□ -0.98
SCARB2-226ENST00000640916 ATG13O75143 517 aa8.95□□□□□ -0.98
SCARB2-226ENST00000640916 RNF40O75150 1001 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms