RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 NINJ2Q9NZG7 142 aa13.81□□□□□ -0.2
CHD1L-210ENST00000622533 ZFP69BQ9UJL9 534 aa13.81□□□□□ -0.2
CHD1L-210ENST00000622533 MYH11P35749 1972 aa13.81□□□□□ -0.2
CHD1L-210ENST00000622533 RBBP6Q7Z6E9 1792 aaKnown RBP13.81□□□□□ -0.2
CHD1L-210ENST00000622533 DCTN3O75935 186 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SGPL1O95470 568 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SLURP2P0DP57 97 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 PTPN4P29074 926 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 GCLMP48507 274 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 ITGA8P53708 1063 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 DYNC1I2Q13409 638 aaKnown RBP13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SGO2Q562F6 1265 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 PPP1R21Q6ZMI0 780 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 NOP9Q86U38 636 aaKnown RBP13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SNF8Q96H20 258 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 FAM81BQ96LP2 452 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 PCDHB18PQ96TA0 734 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 ST6GALNAC4Q9H4F1 302 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 UBN1Q9NPG3 1134 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 HSPBP1Q9NZL4 362 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 ATRNL1Q5VV63 1379 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 COL2A1P02458 1487 aaPredicted RBP13.8□□□□□ -0.2
CHD1L-210ENST00000622533 FAM47DPA6NHR8 397 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 ENTPD3O75355 529 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 GAS8O95995 478 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 GH2P01242 217 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 GSTA2P09210 222 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SPATA31D3P0C874 917 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 PLS3P13797 630 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
CHD1L-210ENST00000622533 RASSF2P50749 326 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 NEK3P51956 506 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 DLG4P78352 724 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 CNPY1Q3B7I2 92 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 STRIP1Q5VSL9 837 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SPATA31D4Q6ZUB0 917 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 DAW1Q8N136 415 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 BBOF1Q8ND07 529 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 CHURC1Q8WUH1 139 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 C7orf43Q8WVR3 580 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SHC3Q92529 594 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 GATA6Q92908 595 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 LRRC4BQ9NT99 713 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 DCTN4Q9UJW0 460 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 MAGEA13PA6NCF6 341 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 IPO5O00410 1097 aaKnown RBP13.8□□□□□ -0.2
CHD1L-210ENST00000622533 CLDN3O15551 220 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 CREB3O43889 395 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 P4HBP07237 508 aaKnown RBP13.8□□□□□ -0.2
CHD1L-210ENST00000622533 CACNB3P54284 484 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 C10orf82Q8WW14 230 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 PCIF1Q9H4Z3 704 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 NPHS2Q9NP85 383 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 WRAP73Q9P2S5 460 aaPredicted RBP13.8□□□□□ -0.2
CHD1L-210ENST00000622533 WASF2Q9Y6W5 498 aa13.8□□□□□ -0.2
CHD1L-210ENST00000622533 FMO1Q01740 532 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 PTK6Q13882 451 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 CYP4F22Q6NT55 531 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 USP37Q86T82 979 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 C4orf33Q8N1A6 199 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 WDR60Q8WVS4 1066 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 CCDC77Q9BR77 488 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 EXOC7Q9UPT5 735 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHD1L-210ENST00000622533 ADGRA3Q8IWK6 1321 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 ECE2O60344 883 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 ASMTLO95671 621 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 LMNAP02545 664 aaKnown RBP13.79□□□□□ -0.2
CHD1L-210ENST00000622533 SLC1A1P43005 524 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 RHBDF2Q6PJF5 856 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 NLRP9Q7RTR0 991 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 MIER3Q7Z3K6 550 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 PPM1KQ8N3J5 372 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
CHD1L-210ENST00000622533 PTPRN2Q92932 1015 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 FAM118BQ9BPY3 351 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 TMEM117Q9H0C3 514 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
CHD1L-210ENST00000622533 PREBQ9HCU5 417 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
CHD1L-210ENST00000622533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.79□□□□□ -0.23e-6■■■■■ 81.5
CHD1L-210ENST00000622533 CHST7Q9NS84 486 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 ACTL7BQ9Y614 415 aa13.79□□□□□ -0.2
CHD1L-210ENST00000622533 FGFR1P11362 822 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 GTF2BQ00403 316 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 OCRLQ01968 901 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 SLC34A1Q06495 639 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 OVGP1Q12889 678 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 SLC27A3Q5K4L6 730 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
CHD1L-210ENST00000622533 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 MROH7Q68CQ1 1323 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 ACAD10Q6JQN1 1059 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 OPTNQ96CV9 577 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 TRIM11Q96F44 468 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 MXRA8Q9BRK3 442 aa13.78□□□□□ -0.2
CHD1L-210ENST00000622533 TRAIPQ9BWF2 469 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 479.6 ms