RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ZNF449Q6P9G9 518 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 PADI6Q6TGC4 694 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 CLNKQ7Z7G1 428 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 OGFOD1Q8N543 542 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SEMA4DQ92854 862 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 PTCD3Q96EY7 689 aaKnown RBP16.49■□□□□ 0.23
GPN1-212ENST00000616939 RIT2Q99578 217 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 OSBPL8Q9BZF1 889 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 WDR35Q9P2L0 1181 aa16.49■□□□□ 0.23
GPN1-212ENST00000616939 SMCHD1A6NHR9 2005 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 ALOX15BO15296 676 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 NPM3O75607 178 aaKnown RBP16.48■□□□□ 0.23
GPN1-212ENST00000616939 CBX6O95503 412 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 IL1BP01584 269 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 FDX1P10109 184 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 BMP3P12645 472 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 CA4P22748 312 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 GCNT1Q02742 428 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 KRT72Q14CN4 511 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 MORF4L2Q15014 288 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 PCNX4Q63HM2 1172 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 PPP1R2P3Q6NXS1 205 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 SESTD1Q86VW0 696 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 CERS5Q8N5B7 392 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 SPOCK2Q92563 424 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 MIPEPQ99797 713 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 BTBD10Q9BSF8 475 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 CADM1Q9BY67 442 aaKnown RBP16.48■□□□□ 0.23
GPN1-212ENST00000616939 SCOCQ9UIL1 159 aa16.48■□□□□ 0.23
GPN1-212ENST00000616939 ENTPD5O75356 428 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 PDHA1P08559 390 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 KRT15P19012 456 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 RPA3P35244 121 aaPredicted RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 CETN2P41208 172 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 VPS41P49754 854 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 KCNQ4P56696 695 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 GSTA3Q16772 222 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 P3H1Q32P28 736 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 CEP55Q53EZ4 464 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 CYP4F22Q6NT55 531 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 APOBEC3HQ6NTF7 200 aaKnown RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 PRUNE1Q86TP1 453 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 ALKBH8Q96BT7 664 aaKnown RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 FAM192AQ9GZU8 254 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 SHOC2Q9UQ13 582 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 MYPNQ86TC9 1320 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 TM9SF1O15321 606 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 HAUS5O94927 633 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 LYPLA2O95372 231 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 NCKAP1LP55160 1127 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 SNAP25P60880 206 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 SLC34A1Q06495 639 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 CCDC6Q16204 474 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 PDCD2Q16342 344 aaPredicted RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 RBM26Q5T8P6 1007 aaKnown RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 MAEAQ7L5Y9 396 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 FBXL13Q8NEE6 735 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 TEKT1Q969V4 418 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 BICD1Q96G01 975 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 STX18Q9P2W9 335 aaKnown RBP16.47■□□□□ 0.23
GPN1-212ENST00000616939 ZNF212Q9UDV6 495 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 EXOC7Q9UPT5 735 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 C2CD2Q9Y426 696 aa16.47■□□□□ 0.23
GPN1-212ENST00000616939 MAGEA13PA6NCF6 341 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 LIASO43766 372 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 TGDSO95455 350 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 PSMG1O95456 288 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 CYP1A1P04798 512 aaPredicted RBP16.46■□□□□ 0.23
GPN1-212ENST00000616939 VIL1P09327 827 aaKnown RBP16.46■□□□□ 0.23
GPN1-212ENST00000616939 POLR2MP0CAP2 368 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 PTPN7P35236 360 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 ADCY1Q08828 1119 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 AP1B1Q10567 949 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 SNX30Q5VWJ9 437 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 LVRNQ6Q4G3 990 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 TRIM72Q6ZMU5 477 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 NSL1Q96IY1 281 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 VCPIP1Q96JH7 1222 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 ZNF577Q9BSK1 485 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 DHRS4Q9BTZ2 278 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 VPS11Q9H270 941 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 SYNCQ9H7C4 482 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 ACP6Q9NPH0 428 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 PDP2Q9P2J9 529 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 PI4KBQ9UBF8 816 aa16.46■□□□□ 0.23
GPN1-212ENST00000616939 A8MXQ7 604 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 TISP43B9A030 160 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 H0Y3Z8 333 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 ATP2A1O14983 1001 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 GSC2O15499 205 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 RAD21O60216 631 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 RTN3O95197 1032 aaPredicted RBP16.45■□□□□ 0.22
GPN1-212ENST00000616939 TSHRP16473 764 aa16.45■□□□□ 0.22
GPN1-212ENST00000616939 BPIFB4P59827 614 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms