RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 RIT2Q99578 217 aa14.55□□□□□ -0.08
UBE2F-223ENST00000612130 PAPOLBQ9NRJ5 636 aaKnown RBP14.55□□□□□ -0.08
UBE2F-223ENST00000612130 NMRK1Q9NWW6 199 aa14.55□□□□□ -0.08
UBE2F-223ENST00000612130 CPSF2Q9P2I0 782 aaKnown RBP14.55□□□□□ -0.08
UBE2F-223ENST00000612130 PSMC3IPQ9P2W1 217 aaPredicted RBP14.55□□□□□ -0.08
UBE2F-223ENST00000612130 PRR12Q9ULL5 1215 aa14.55□□□□□ -0.08
UBE2F-223ENST00000612130 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
UBE2F-223ENST00000612130 SPDYE5A6NIY4 337 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 SIGLEC16A6NMB1 481 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 FAM196BA6NMK8 535 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 H0Y3Z8 333 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 CCDC22O60826 627 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 CFBP00751 764 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 SP100P23497 879 aaPredicted RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 GTF2H1P32780 548 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 TUBP50607 506 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 SLC1A5Q15758 541 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 SNRNP35Q16560 246 aaKnown RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 TMEM154Q6P9G4 183 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 GSTA5Q7RTV2 222 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 FBXL13Q8NEE6 735 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 ZSWIM2Q8NEG5 633 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 EXD1Q8NHP7 514 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 ZNF75CPQ92670 426 aaPredicted RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 SYT15Q9BQS2 421 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 TIPINQ9BVW5 301 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 HEMGNQ9BXL5 484 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 ETAA1Q9NY74 926 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 FETUBQ9UGM5 382 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 NFASCO94856 1347 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 POC1B-GALNT4F8VUJ3 575 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 VIL1P09327 827 aaKnown RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 GNAT1P11488 350 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 SKIP12755 728 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 GCNT1Q02742 428 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 ABCB5Q2M3G0 1257 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 ZC3H12AQ5D1E8 599 aaKnown RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 DRICH1Q6PGQ1 229 aaPredicted RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 HAUS6Q7Z4H7 955 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 C4orf33Q8N1A6 199 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 GALNT15Q8N3T1 639 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 OGFOD1Q8N543 542 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 TMC2Q8TDI7 906 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 MIPEPQ99797 713 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.54□□□□□ -0.083e-23■■■■■ 559
UBE2F-223ENST00000612130 RAB20Q9NX57 234 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 ANKFY1Q9P2R3 1169 aa14.54□□□□□ -0.08
UBE2F-223ENST00000612130 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.54□□□□□ -0.08
UBE2F-223ENST00000612130 MYPNQ86TC9 1320 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 EIF4E1BA6NMX2 242 aaKnown RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 IPO5O00410 1097 aaKnown RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 GSTA2P09210 222 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 ARP10275 920 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 CETN2P41208 172 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 GCLCP48506 637 aaPredicted RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 MORF4L2Q15014 288 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 CCDC6Q16204 474 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 PTF1AQ7RTS3 328 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 CBWD2Q8IUF1 395 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 TRAPPC9Q96Q05 1148 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 EXOC7Q9UPT5 735 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 DDTLA6NHG4 134 aaPredicted RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 LIASO43766 372 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 ZC3H11AO75152 810 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 RAB27AP51159 221 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 NCKAP1LP55160 1127 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 ENPEPQ07075 957 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 EAPPQ56P03 285 aaPredicted RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 LVRNQ6Q4G3 990 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 USP37Q86T82 979 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 MTDHQ86UE4 582 aaKnown RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 TAS1R2Q8TE23 839 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 DHX38Q92620 1227 aaKnown RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 IFT43Q96FT9 208 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 ZDHHC15Q96MV8 337 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 BTBD10Q9BSF8 475 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 CADM1Q9BY67 442 aaKnown RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 PHACTR1Q9C0D0 580 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 MMADHCQ9H3L0 296 aaPredicted RBP14.53□□□□□ -0.08
UBE2F-223ENST00000612130 VPS37BQ9H9H4 285 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 NPHS2Q9NP85 383 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 SHOC2Q9UQ13 582 aa14.53□□□□□ -0.08
UBE2F-223ENST00000612130 GOLGA8IPA6NC78 632 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 GOLGA8JA6NMD2 632 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 ATP2A1O14983 1001 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 RIMBP2O15034 1052 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 ALOX15BO15296 676 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 HAUS5O94927 633 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 P4HBP07237 508 aaKnown RBP14.52□□□□□ -0.09
UBE2F-223ENST00000612130 KRT5P13647 590 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 CRKP46108 304 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 NSFP46459 744 aaKnown RBP14.52□□□□□ -0.09
UBE2F-223ENST00000612130 RARRES1P49788 294 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 GNPTABQ3T906 1256 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 KHDC1Q4VXA5 237 aaKnown RBP14.52□□□□□ -0.09
UBE2F-223ENST00000612130 EFHC2Q5JST6 749 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 LIN9Q5TKA1 542 aa14.52□□□□□ -0.09
UBE2F-223ENST00000612130 MON1BQ7L1V2 547 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms