RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 MRPL58Q14197 206 aaKnown RBP16.18■□□□□ 0.18
CTSA-216ENST00000607212 TEAD2Q15562 447 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 RSPO4Q2I0M5 234 aaPredicted RBP16.18■□□□□ 0.18
CTSA-216ENST00000607212 VITQ6UXI7 678 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 ZPBP2Q6X784 338 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 SUMF1Q8NBK3 374 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 TMEM161BQ8NDZ6 487 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 FAM200AQ8TCP9 573 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 DEPDC1BQ8WUY9 529 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 CLDN23Q96B33 292 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 BORCS6Q96GS4 357 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 MMTAG2Q9BU76 263 aaKnown RBP16.18■□□□□ 0.18
CTSA-216ENST00000607212 RPF1Q9H9Y2 349 aaKnown RBP16.18■□□□□ 0.18
CTSA-216ENST00000607212 CEP72Q9P209 647 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 LARSQ9P2J5 1176 aaKnown RBP16.18■□□□□ 0.18
CTSA-216ENST00000607212 GMEB2Q9UKD1 530 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 UBQLN1Q9UMX0 589 aaKnown RBP16.18■□□□□ 0.18
CTSA-216ENST00000607212 YIPF1Q9Y548 306 aa16.18■□□□□ 0.18
CTSA-216ENST00000607212 K7ENM7 598 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 DPYSL4O14531 572 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 HNRNPDLO14979 420 aaKnown RBP16.17■□□□□ 0.18
CTSA-216ENST00000607212 MICAL2O94851 1124 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 RPS9P46781 194 aaKnown RBP16.17■□□□□ 0.18
CTSA-216ENST00000607212 ALDH1A3P47895 512 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 KPNA1P52294 538 aaPredicted RBP16.17■□□□□ 0.18
CTSA-216ENST00000607212 MCL1Q07820 350 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 ARMCX5Q6P1M9 558 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 POTEHQ6S545 545 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 TMEM130Q8N3G9 435 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 SYT2Q8N9I0 419 aaPredicted RBP16.17■□□□□ 0.18
CTSA-216ENST00000607212 CALML4Q96GE6 196 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 ZSWIM3Q96MP5 696 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 PNMA5Q96PV4 448 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 LMAN1LQ9HAT1 526 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 PLEKHA5Q9HAU0 1116 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 ZNF334Q9HCZ1 680 aaPredicted RBP16.17■□□□□ 0.18
CTSA-216ENST00000607212 MAFFQ9ULX9 164 aa16.17■□□□□ 0.18
CTSA-216ENST00000607212 DMDP11532 3685 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 VPS13AQ96RL7 3174 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 A0A1W2PRU2 124 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 MED19A0JLT2 244 aaPredicted RBP16.16■□□□□ 0.18
CTSA-216ENST00000607212 HEPACAM2A8MVW5 462 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 TNFSF9P41273 254 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 GUCY2FP51841 1108 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
CTSA-216ENST00000607212 DUSP4Q13115 394 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 LPAL2Q16609 132 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 KYAT1Q16773 422 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 PRR23BQ6ZRT6 265 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 HAUS6Q7Z4H7 955 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 GPBP1Q86WP2 473 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 GPIHBP1Q8IV16 184 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 MYCT1Q8N699 235 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 GPR161Q8N6U8 529 aaKnown RBP16.16■□□□□ 0.18
CTSA-216ENST00000607212 NTPCRQ9BSD7 190 aaKnown RBP16.16■□□□□ 0.18
CTSA-216ENST00000607212 KCND2Q9NZV8 630 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 SLC27A5Q9Y2P5 690 aa16.16■□□□□ 0.18
CTSA-216ENST00000607212 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.16■□□□□ 0.18
CTSA-216ENST00000607212 OR6C75A6NL08 312 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 LACTBL1A8MY62 500 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 MEFVO15553 781 aaPredicted RBP16.15■□□□□ 0.18
CTSA-216ENST00000607212 ODC1P11926 461 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 CCNE1P24864 410 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 NRLP54845 237 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 SLC12A3P55017 1021 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 TAF12Q16514 161 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 OVOS1Q6IE37 1185 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 BEST2Q8NFU1 509 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 SHKBP1Q8TBC3 707 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 E2F7Q96AV8 911 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 MSTO1Q9BUK6 570 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 OXCT2Q9BYC2 517 aaPredicted RBP16.15■□□□□ 0.18
CTSA-216ENST00000607212 GPR88Q9GZN0 384 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 CHRDQ9H2X0 955 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 ATXN3LQ9H3M9 355 aa16.15■□□□□ 0.18
CTSA-216ENST00000607212 PRMT8Q9NR22 394 aaPredicted RBP16.15■□□□□ 0.18
CTSA-216ENST00000607212 CDV3Q9UKY7 258 aaKnown RBP16.15■□□□□ 0.18
CTSA-216ENST00000607212 ANK1P16157 1881 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 TCHHQ07283 1943 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 M0QZQ0 153 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 NRG2O14511 850 aaPredicted RBP16.14■□□□□ 0.17
CTSA-216ENST00000607212 TBCAO75347 108 aaKnown RBP16.14■□□□□ 0.17
CTSA-216ENST00000607212 CYP3A5P20815 502 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 GJB2P29033 226 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 LRPAP1P30533 357 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 UBA7P41226 1012 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 CCR3P51677 355 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 NCKAP1LP55160 1127 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 ARHGAP15Q53QZ3 475 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 HYIQ5T013 277 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 MFSD6LQ8IWD5 586 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 ZBTB44Q8NCP5 570 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 TTC8Q8TAM2 541 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 GCNAQ96QF7 691 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 FAM126AQ9BYI3 521 aaPredicted RBP16.14■□□□□ 0.17
CTSA-216ENST00000607212 EPC1Q9H2F5 836 aa16.14■□□□□ 0.17
CTSA-216ENST00000607212 TTC26A0AVF1 554 aa16.13■□□□□ 0.17
CTSA-216ENST00000607212 SLC38A8A6NNN8 435 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms