RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 NFX1Q12986 1120 aaKnown RBP16.21■□□□□ 0.18
HIF3A-218ENST00000600383 ZNF606Q8WXB4 792 aa16.21■□□□□ 0.18
HIF3A-218ENST00000600383 HPDLQ96IR7 371 aa16.21■□□□□ 0.18
HIF3A-218ENST00000600383 RHOXF2Q9BQY4 288 aa16.21■□□□□ 0.18
HIF3A-218ENST00000600383 KLK14Q9P0G3 267 aa16.21■□□□□ 0.18
HIF3A-218ENST00000600383 PARP2Q9UGN5 583 aa16.21■□□□□ 0.18
HIF3A-218ENST00000600383 CNTN6Q9UQ52 1028 aa16.21■□□□□ 0.18
HIF3A-218ENST00000600383 CDY2AQ9Y6F7 541 aa16.21■□□□□ 0.18
HIF3A-218ENST00000600383 HMGCRP04035 888 aa16.2■□□□□ 0.18
HIF3A-218ENST00000600383 ZSCAN20P17040 1043 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-218ENST00000600383 MRPS6P82932 125 aaKnown RBP16.2■□□□□ 0.18
HIF3A-218ENST00000600383 RSPH3Q86UC2 560 aa16.2■□□□□ 0.18
HIF3A-218ENST00000600383 RABGGTAQ92696 567 aa16.2■□□□□ 0.18
HIF3A-218ENST00000600383 WNT8BQ93098 351 aa16.2■□□□□ 0.18
HIF3A-218ENST00000600383 ZMAT2Q96NC0 199 aaKnown RBP16.2■□□□□ 0.18
HIF3A-218ENST00000600383 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-218ENST00000600383 NOC2LQ9Y3T9 749 aaKnown RBP16.2■□□□□ 0.18
HIF3A-218ENST00000600383 C2CD2Q9Y426 696 aa16.2■□□□□ 0.18
HIF3A-218ENST00000600383 KIF4AO95239 1232 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 UNGP13051 313 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 AXLP30530 894 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 MAP2K2P36507 400 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 PAFAH1B1P43034 410 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 NSFP46459 744 aaKnown RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 ORC1Q13415 861 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 TWF2Q6IBS0 349 aaKnown RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 CD302Q8IX05 232 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 GPR161Q8N6U8 529 aaKnown RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 UBR7Q8N806 425 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 ZNF784Q8NCA9 323 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 NUP85Q9BW27 656 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 AMFRQ9UKV5 643 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 RECQL4O94761 1208 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 BRD2P25440 801 aaKnown RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 RBP5P82980 135 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 C2orf54Q08AI8 447 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 PTGISQ16647 500 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 SLFN11Q7Z7L1 901 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 NT5DC3Q86UY8 548 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 PDCL2Q8N4E4 241 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 KLHDC9Q8NEP7 349 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 CXorf38Q8TB03 319 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 PLEKHA5Q9HAU0 1116 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 CNOT8Q9UFF9 292 aaKnown RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 DDX20Q9UHI6 824 aaKnown RBP16.19■□□□□ 0.18
HIF3A-218ENST00000600383 CITO14578 2027 aa16.19■□□□□ 0.18
HIF3A-218ENST00000600383 ZNF132P52740 706 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 MESDQ14696 234 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 FBXO38Q6PIJ6 1188 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 FAM228AQ86W67 206 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 PCSK9Q8NBP7 692 aaKnown RBP16.18■□□□□ 0.18
HIF3A-218ENST00000600383 C18orf25Q96B23 403 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-218ENST00000600383 BTBD6Q96KE9 485 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 SNX27Q96L92 541 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 PARD6BQ9BYG5 372 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 SMYD3Q9H7B4 428 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 ITGA11Q9UKX5 1188 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 TRIP11Q15643 1979 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 RPS6KA5O75582 802 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 CYP1A1P04798 512 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-218ENST00000600383 CD19P15391 556 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 ATICP31939 592 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 THPOP40225 353 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 CFAP221Q4G0U5 840 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 RNF180Q86T96 592 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 NT5DC4Q86YG4 428 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 MCOLN2Q8IZK6 566 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 ZNF564Q8TBZ8 553 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-218ENST00000600383 CFHR5Q9BXR6 569 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 SDCBP2Q9H190 292 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 GTF3C4Q9UKN8 822 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 ALG6Q9Y672 507 aa16.18■□□□□ 0.18
HIF3A-218ENST00000600383 GRIN2DO15399 1336 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 SCN10AQ9Y5Y9 1956 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 CHRNA1P02708 482 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 CYP1A2P05177 515 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 YY1P25490 414 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 YWHAEP62258 255 aaKnown RBP16.17■□□□□ 0.18
HIF3A-218ENST00000600383 NKX3-2P78367 333 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 UBXN11Q5T124 520 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 CCSAPQ6IQ19 270 aaPredicted RBP16.17■□□□□ 0.18
HIF3A-218ENST00000600383 LLGL2Q6P1M3 1020 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 SERINC5Q86VE9 423 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 SESTD1Q86VW0 696 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 C11orf70Q9BRQ4 267 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 BCO2Q9BYV7 579 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 TUBGCP4Q9UGJ1 667 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 ST3GAL5Q9UNP4 418 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 NOD1Q9Y239 953 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 STXBP5LQ9Y2K9 1186 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 IPPQ9Y573 584 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 TRPV2Q9Y5S1 764 aa16.17■□□□□ 0.18
HIF3A-218ENST00000600383 CEP104O60308 925 aa16.16■□□□□ 0.18
HIF3A-218ENST00000600383 P4HA1P13674 534 aa16.16■□□□□ 0.18
HIF3A-218ENST00000600383 RRM1P23921 792 aa16.16■□□□□ 0.18
HIF3A-218ENST00000600383 TNNC1P63316 161 aa16.16■□□□□ 0.18
HIF3A-218ENST00000600383 CENPCQ03188 943 aa16.16■□□□□ 0.18
HIF3A-218ENST00000600383 MYO1EQ12965 1108 aa16.16■□□□□ 0.18
HIF3A-218ENST00000600383 DPH6Q7L8W6 267 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms