RNA–Protein interactions for RNA: ENST00000593101.5

PRKCSH-219, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-219ENST00000593101 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
PRKCSH-219ENST00000593101 SNX9Q9Y5X1 595 aa16.68■□□□□ 0.26
PRKCSH-219ENST00000593101 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 SPTLC1O15269 473 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 KIF4AO95239 1232 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 IGFBP6P24592 240 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 BRCC3P46736 316 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 RAB30Q15771 203 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 KLHDC7AQ5VTJ3 777 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 PHLDB3Q6NSJ2 640 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 CD300LGQ6UXG3 332 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 DRC7Q8IY82 874 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 ANP32BQ92688 251 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 MRFAP1L1Q96HT8 127 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 FAM81BQ96LP2 452 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 NUP58Q9BVL2 599 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 APOBEC3GQ9HC16 384 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 UBE2TQ9NPD8 197 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 PLCB1Q9NQ66 1216 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 FAM207AQ9NSI2 230 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 SPG21Q9NZD8 308 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 ADAM28Q9UKQ2 775 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 POLIQ9UNA4 740 aa16.67■□□□□ 0.26
PRKCSH-219ENST00000593101 COL4A6Q14031 1691 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 LINC01553A4QN01 128 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 F8W810 466 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 CYB561D2O14569 222 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 HUS1O60921 280 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 ITGB1P05556 798 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 PBX1P40424 430 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 APBA1Q02410 837 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 TIGD5Q53EQ6 642 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 RRAGAQ7L523 313 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 VSTM4Q8IW00 320 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 ARHGEF19Q8IW93 802 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 PPM1KQ8N3J5 372 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 CLP1Q92989 425 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 TMEM169Q96HH4 297 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 SENP8Q96LD8 212 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 NIF3L1Q9GZT8 377 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 SIX2Q9NPC8 291 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 APEX2Q9UBZ4 518 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 RWDD3Q9Y3V2 267 aa16.66■□□□□ 0.26
PRKCSH-219ENST00000593101 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.66■□□□□ 0.265e-8■■■■□ 23.6
PRKCSH-219ENST00000593101 ARHGEF37A1IGU5 675 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 I3L4J1 428 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 CA3P07451 260 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 TRIM21P19474 475 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 TBXAS1P24557 533 aaPredicted RBP16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 PPM1AP35813 382 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 BMPR1AP36894 532 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 PBX2P40425 430 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 MFAP3P55082 362 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 POLR2FP61218 127 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 KRT17Q04695 432 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 GJB7Q6PEY0 223 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 CACNA2D4Q7Z3S7 1137 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 SLC39A11Q8N1S5 342 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 APPL2Q8NEU8 664 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 FAXDC2Q96IV6 333 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 PBX4Q9BYU1 374 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 PRO3102Q9H379 93 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 MARCH5Q9NX47 278 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 DNAJC12Q9UKB3 198 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 YBX2Q9Y2T7 364 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 SCN1AP35498 2009 aa16.65■□□□□ 0.26
PRKCSH-219ENST00000593101 NOL4O94818 638 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 WEE2P0C1S8 567 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 UCHL3P15374 230 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 CTNNB1P35222 781 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 AARSP49588 968 aaKnown RBP eCLIP16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 ELAVL2Q12926 359 aaKnown RBP16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 CUL2Q13617 745 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 ARHGAP44Q17R89 818 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 DPY19L2P1Q6NXN4 242 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 FUT10Q6P4F1 479 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 SCARA5Q6ZMJ2 495 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 ENOSF1Q7L5Y1 443 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 DPH6Q7L8W6 267 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 TMC6Q7Z403 805 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 PPFIBP1Q86W92 1011 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 METTL23Q86XA0 190 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 TOP6BLQ8N6T0 577 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 CPLX3Q8WVH0 158 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 SUSD3Q96L08 255 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 NKX2-4Q9H2Z4 354 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 PCDHB8Q9UN66 801 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 SF3B1O75533 1304 aaKnown RBP eCLIP16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 ITIH6Q6UXX5 1313 aa16.64■□□□□ 0.25
PRKCSH-219ENST00000593101 CEP290O15078 2479 aa16.63■□□□□ 0.25
PRKCSH-219ENST00000593101 M0QZQ0 153 aa16.63■□□□□ 0.25
PRKCSH-219ENST00000593101 FGF18O76093 207 aa16.63■□□□□ 0.25
PRKCSH-219ENST00000593101 TPM1P09493 284 aa16.63■□□□□ 0.25
PRKCSH-219ENST00000593101 FAM163BP0C2L3 166 aa16.63■□□□□ 0.25
PRKCSH-219ENST00000593101 ODC1P11926 461 aa16.63■□□□□ 0.25
PRKCSH-219ENST00000593101 RFX1P22670 979 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms