RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	PCDHB6	Q9Y5E3	794 aa		19.97	■□□□□ 0.79
CIRBP-238	ENST00000592412	USP24	Q9UPU5	2620 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	DCDC2B	A2VCK2	349 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	HEPACAM2	A8MVW5	462 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412		M0QZQ0	153 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	OR4Q2	P0C623	313 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	SDHB	P21912	280 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	DMWD	Q09019	674 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	IQCE	Q6IPM2	695 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	APPL2	Q8NEU8	664 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	DRC1	Q96MC2	740 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	IER2	Q9BTL4	223 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	ASAH2	Q9NR71	780 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	ANKFY1	Q9P2R3	1169 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	CDV3	Q9UKY7	258 aa	Known RBP	19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	MAFF	Q9ULX9	164 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	DNM3	Q9UQ16	869 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	TIMM13	Q9Y5L4	95 aa	Predicted RBP	19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	MAP1B	P46821	2468 aa	Known RBP	19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	CFAP47	Q6ZTR5	3102 aa		19.96	■□□□□ 0.79
CIRBP-238	ENST00000592412	TOM1L1	O75674	476 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	SEC24B	O95487	1268 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	CPB1	P15086	417 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	CCNE1	P24864	410 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	SPAG1	Q07617	926 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	SPEM2	Q0P670	501 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	NOLC1	Q14978	699 aa	Known RBP eCLIP	19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	STXBP5	Q5T5C0	1151 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	ELMOD1	Q8N336	334 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	LEMD2	Q8NC56	503 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	TMEM161B	Q8NDZ6	487 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	LRRC3B	Q96PB8	259 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	LLPH	Q9BRT6	129 aa	Known RBP	19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	MKNK1	Q9BUB5	465 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	C17orf75	Q9HAS0	396 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	GMEB2	Q9UKD1	530 aa		19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	19.95	■□□□□ 0.78
CIRBP-238	ENST00000592412	ZNF263	O14978	683 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	KRT37	O76014	449 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	OAZ2	O95190	189 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	CXCL8	P10145	99 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	MAPT	P10636	758 aa	Known RBP	19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	GUCY2C	P25092	1073 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	U2AF2	P26368	475 aa	Known RBP eCLIP	19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	HOXC13	P31276	330 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	SOX9	P48436	509 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	AARS	P49588	968 aa	Known RBP eCLIP	19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	CCR3	P51677	355 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	NRL	P54845	237 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	MCL1	Q07820	350 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	RAD51AP2	Q09MP3	1159 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	ZBTB6	Q15916	424 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	LAIR1	Q6GTX8	287 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	SPIRE2	Q8WWL2	714 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	PGLYRP2	Q96PD5	576 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	RTKN	Q9BST9	563 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	RBM12	Q9NTZ6	932 aa	Known RBP	19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	C2orf42	Q9NWW7	574 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	LIMCH1	Q9UPQ0	1083 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	LAMA1	P25391	3075 aa		19.94	■□□□□ 0.78
CIRBP-238	ENST00000592412	CHD6	Q8TD26	2715 aa		19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412		A0A1W2PRU2	124 aa		19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	TTC26	A0AVF1	554 aa		19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	LRPAP1	P30533	357 aa		19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	MLLT6	P55198	1093 aa	Predicted RBP	19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	FCHO2	Q0JRZ9	810 aa		19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	TXNDC11	Q6PKC3	985 aa		19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	CELF5	Q8N6W0	485 aa	Known RBP	19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	NOL7	Q9UMY1	257 aa	Known RBP	19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	STK24	Q9Y6E0	443 aa		19.93	■□□□□ 0.78
CIRBP-238	ENST00000592412	SLC38A8	A6NNN8	435 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412		K7ESF4	209 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	HR	O43593	1189 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	PLS3	P13797	630 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	TNFSF9	P41273	254 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	CXCL12	P48061	93 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	GUCY2F	P51841	1108 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	YWHAH	Q04917	246 aa	Predicted RBP	19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	DUSP4	Q13115	394 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	SRSF5	Q13243	272 aa	Known RBP	19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	KRT79	Q5XKE5	535 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	ZPBP2	Q6X784	338 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412		Q6ZS52	159 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	GPIHBP1	Q8IV16	184 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	PNMA5	Q96PV4	448 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	SLITRK6	Q9H5Y7	841 aa		19.92	■□□□□ 0.78
CIRBP-238	ENST00000592412	CHURC1-FNTB	B4DL54	471 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	PPEF2	O14830	753 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	CHAD	O15335	359 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	FAM189A1	O60320	539 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	PAPSS2	O95340	614 aa	Predicted RBP	19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	RET	P07949	1114 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	FNTB	P49356	437 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	GPR17	Q13304	367 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	GNL2	Q13823	731 aa	Known RBP	19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	PPP2R5D	Q14738	602 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	HYI	Q5T013	277 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	PRR23B	Q6ZRT6	265 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	GAREM2	Q75VX8	874 aa		19.91	■□□□□ 0.78
CIRBP-238	ENST00000592412	SPEM1	Q8N4L4	309 aa		19.91	■□□□□ 0.78

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