RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TTC26A0AVF1 554 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 H0YCG3 227 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 H3BQV1 296 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 CLDN3O15551 220 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 ADRB2P07550 413 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 DCNP07585 359 aaKnown RBP11.35□□□□□ -0.59
VPS4B-207ENST00000591519 PLA2G4BP0C869 781 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 GLULP15104 373 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 RFX1P22670 979 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 LRPAP1P30533 357 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 ELF1P32519 619 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 NOLC1Q14978 699 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS4B-207ENST00000591519 SLC5A9Q2M3M2 681 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 C1orf210Q8IVY1 113 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 ST13P5Q8NFI4 369 aaPredicted RBP11.35□□□□□ -0.59
VPS4B-207ENST00000591519 PJA1Q8NG27 643 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 C18orf25Q96B23 403 aaPredicted RBP11.35□□□□□ -0.59
VPS4B-207ENST00000591519 BORCS6Q96GS4 357 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 AK8Q96MA6 479 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 TSPAN18Q96SJ8 248 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 LARSQ9P2J5 1176 aaKnown RBP11.35□□□□□ -0.59
VPS4B-207ENST00000591519 MRPS23Q9Y3D9 190 aaKnown RBP11.35□□□□□ -0.59
VPS4B-207ENST00000591519 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.35□□□□□ -0.59
VPS4B-207ENST00000591519 NUB1Q9Y5A7 615 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 CACNA1IQ9P0X4 2223 aa11.35□□□□□ -0.59
VPS4B-207ENST00000591519 MYH11P35749 1972 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 VPS13AQ96RL7 3174 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 VWA3AA6NCI4 1184 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 M0QZQ0 153 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 ZNF197O14709 1029 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 OAZ2O95190 189 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 SEC24AO95486 1093 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 CLTAP09496 248 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 CYP3A5P20815 502 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
VPS4B-207ENST00000591519 NCKAP1LP55160 1127 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
VPS4B-207ENST00000591519 MLF2Q15773 248 aaPredicted RBP11.34□□□□□ -0.59
VPS4B-207ENST00000591519 KYAT1Q16773 422 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 PRSS36Q5K4E3 855 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 ADSSL1Q8N142 457 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 APPL2Q8NEU8 664 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 BEST2Q8NFU1 509 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 ELSPBP1Q96BH3 223 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 MCRS1Q96EZ8 462 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 NELL2Q99435 816 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 OXCT2Q9BYC2 517 aaPredicted RBP11.34□□□□□ -0.59
VPS4B-207ENST00000591519 FOXQ1Q9C009 403 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 HAPLN2Q9GZV7 340 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 AFF4Q9UHB7 1163 aaKnown RBP11.34□□□□□ -0.59
VPS4B-207ENST00000591519 ODF2LQ9ULJ1 636 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 ADGRG1Q9Y653 693 aa11.34□□□□□ -0.59
VPS4B-207ENST00000591519 K7ELQ4 463 aaPredicted RBP11.33□□□□□ -0.6
VPS4B-207ENST00000591519 PRRG1O14668 218 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 FAM189A1O60320 539 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 PIGRP01833 764 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 LMNAP02545 664 aaKnown RBP11.33□□□□□ -0.6
VPS4B-207ENST00000591519 LRG1P02750 347 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 SP9P0CG40 484 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 MAGEA9P43362 315 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF131P52739 623 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 EPHA5P54756 1037 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 FOXK2Q01167 660 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 RAD51AP2Q09MP3 1159 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 ZRSR1Q15695 479 aaKnown RBP11.33□□□□□ -0.6
VPS4B-207ENST00000591519 CTXN3Q4LDR2 81 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 SPECC1Q5M775 1068 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 LARP1BQ659C4 914 aaKnown RBP11.33□□□□□ -0.6
VPS4B-207ENST00000591519 HAUS6Q7Z4H7 955 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 MAML2Q8IZL2 1156 aaPredicted RBP11.33□□□□□ -0.6
VPS4B-207ENST00000591519 CLDN23Q96B33 292 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 PLIN2Q99541 437 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 PLA2G2FQ9BZM2 168 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 MTF2Q9Y483 593 aaPredicted RBP11.33□□□□□ -0.6
VPS4B-207ENST00000591519 INSL5Q9Y5Q6 135 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 PDCD11Q14690 1871 aaKnown RBP11.33□□□□□ -0.6
VPS4B-207ENST00000591519 FANCMQ8IYD8 2048 aa11.33□□□□□ -0.6
VPS4B-207ENST00000591519 SPTBN4Q9H254 2564 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 VPS37CA5D8V6 355 aaPredicted RBP11.32□□□□□ -0.6
VPS4B-207ENST00000591519 FAM170BA6NMN3 283 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 BMP15O95972 392 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 CXCL8P10145 99 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 PAX3P23760 479 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 MARCKSP29966 332 aaPredicted RBP11.32□□□□□ -0.6
VPS4B-207ENST00000591519 MCM4P33991 863 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 UBA7P41226 1012 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 ADCY1Q08828 1119 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 FZD5Q13467 585 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 CUL4AQ13619 759 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF528Q3MIS6 628 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 TANGO2Q6ICL3 276 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 CD302Q8IX05 232 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 LEMD2Q8NC56 503 aa11.32□□□□□ -0.6
VPS4B-207ENST00000591519 ING5Q8WYH8 240 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms