RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 NFIL3Q16649 462 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 DUOXA2Q1HG44 320 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 SV2CQ496J9 727 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 CTXN3Q4LDR2 81 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 RARS2Q5T160 578 aaKnown RBP10.92□□□□□ -0.66
TPM4-207ENST00000588032 ZNF280DQ6N043 979 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 GPR149Q86SP6 731 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 CBWD2Q8IUF1 395 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 WDR49Q8IV35 697 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 GJD3Q8N144 294 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 KREMEN2Q8NCW0 462 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 ZSWIM2Q8NEG5 633 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 ZNF461Q8TAF7 563 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 SPATA20Q8TB22 786 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 ANKRD36BP1Q96IX9 119 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 ZNF560Q96MR9 790 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 FNBP1Q96RU3 617 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 PDE11AQ9HCR9 933 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 INTS13Q9NVM9 706 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 DMAC2Q9NW81 257 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 TRAF3IP3Q9Y228 551 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 CDY1Q9Y6F8 540 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 TRIP11Q15643 1979 aa10.92□□□□□ -0.66
TPM4-207ENST00000588032 TRANK1O15050 2925 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 CCDC195A0A1B0GUA6 201 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 KPNA7A9QM74 516 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 TULP1O00294 542 aaPredicted RBP10.91□□□□□ -0.66
TPM4-207ENST00000588032 ZMYND10O75800 440 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 ABLIM3O94929 683 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 TNNC2P02585 160 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 CYP11A1P05108 521 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 HNRNPA1P09651 372 aaKnown RBP eCLIP10.91□□□□□ -0.66
TPM4-207ENST00000588032 TMEM191BP0C7N4 346 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 ODC1P11926 461 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 RPL13P26373 211 aaKnown RBP10.91□□□□□ -0.66
TPM4-207ENST00000588032 HOXA9P31269 272 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 GUCY2FP51841 1108 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 AP3M2P53677 418 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 RBP5P82980 135 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 ZP2Q05996 745 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 CYP24A1Q07973 514 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 PNOCQ13519 176 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 COBLL1Q53SF7 1204 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 LIN9Q5TKA1 542 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 TPGS2Q68CL5 300 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 TMC5Q6UXY8 1006 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 CLEC17AQ6ZS10 378 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 CCDC149Q6ZUS6 474 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 METTL23Q86XA0 190 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 GLYCTKQ8IVS8 523 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 CSGALNACT2Q8N6G5 542 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 LRRC52Q8N7C0 313 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 C12orf76Q8N812 135 aaPredicted RBP10.91□□□□□ -0.66
TPM4-207ENST00000588032 RDH13Q8NBN7 331 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 SMARCE1Q969G3 411 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 SENP8Q96LD8 212 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 MFSD14AQ96MC6 490 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 FBXL5Q9UKA1 691 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 FBXW11Q9UKB1 542 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 NR2E1Q9Y466 385 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 PCDHA5Q9Y5H7 936 aa10.91□□□□□ -0.66
TPM4-207ENST00000588032 COL6A3P12111 3177 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 OR6C75A6NL08 312 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 CYB561D2O14569 222 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 MAPK13O15264 365 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 ADAM12O43184 909 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 NR3C1P04150 777 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 ITGB3P05106 788 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 POU2F2P09086 479 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 SPATA31D3P0C874 917 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 ATF2P15336 505 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 TNNI1P19237 187 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 ELF1P32519 619 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
TPM4-207ENST00000588032 PPP1R2P41236 205 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 WNT7BP56706 349 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 ROR1Q01973 937 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 MYO1EQ12965 1108 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 PPM1LQ5SGD2 360 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 ZNF658Q5TYW1 1059 aaPredicted RBP10.9□□□□□ -0.66
TPM4-207ENST00000588032 OVOS1Q6IE37 1185 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 SPATA31D4Q6ZUB0 917 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 THEM5Q8N1Q8 247 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 C1orf127Q8N9H9 656 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 SPATA18Q8TC71 538 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 IPO9Q96P70 1041 aaKnown RBP10.9□□□□□ -0.66
TPM4-207ENST00000588032 NECAB3Q96P71 396 aaPredicted RBP10.9□□□□□ -0.66
TPM4-207ENST00000588032 CGRRF1Q99675 332 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 APOL5Q9BWW9 433 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 PRKD2Q9BZL6 878 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 PIDD1Q9HB75 910 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 AGAP1Q9UPQ3 857 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 USTQ9Y2C2 406 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 FRMD4BQ9Y2L6 1034 aa10.9□□□□□ -0.66
TPM4-207ENST00000588032 PDCD11Q14690 1871 aaKnown RBP10.89□□□□□ -0.67
TPM4-207ENST00000588032 LOC730098B7Z3J9 87 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 PPEF2O14830 753 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 SPTLC1O15269 473 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 XYLBO75191 536 aa10.89□□□□□ -0.67
TPM4-207ENST00000588032 GADD45BO75293 160 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms