RNA–Protein interactions for RNA: ENST00000586748.5

YIPF2-204, Transcript of Yip1 domain family member 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF2, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIPF2-204	ENST00000586748	TRAF7	Q6Q0C0	670 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	ZNF662	Q6ZS27	426 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	USP38	Q8NB14	1042 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	SMG8	Q8ND04	991 aa	Known RBP	18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	TAF4B	Q92750	862 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	TSPAN18	Q96SJ8	248 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	OSBPL7	Q9BZF2	842 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	XYLT2	Q9H1B5	865 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	CNTN3	Q9P232	1028 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	YBX2	Q9Y2T7	364 aa	Known RBP	18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	IPP	Q9Y573	584 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748	EYS	Q5T1H1	3165 aa		18.74	■□□□□ 0.59
YIPF2-204	ENST00000586748		A0A0U1RQJ8	604 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	GHR	P10912	638 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	RFC2	P35250	354 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	ARHGAP25	P42331	645 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	GFPT1	Q06210	699 aa	Predicted RBP	18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	NFX1	Q12986	1120 aa	Known RBP	18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	ZBTB6	Q15916	424 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	XKR4	Q5GH76	650 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	SMYD5	Q6GMV2	418 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	OLIG1	Q8TAK6	271 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	ATRIP	Q8WXE1	791 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	KIF12	Q96FN5	646 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	ARID3A	Q99856	593 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	PADI3	Q9ULW8	664 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748	CHD9	Q3L8U1	2897 aa		18.73	■□□□□ 0.59
YIPF2-204	ENST00000586748		A0A087X0T9	212 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	KIF2A	O00139	706 aa	Predicted RBP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	FAM228B	P0C875	321 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	ATP2A2	P16615	1042 aa	Known RBP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	ACO1	P21399	889 aa	Known RBP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	CD52	P31358	61 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	VAV2	P52735	878 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	PAK2	Q13177	524 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	VPS36	Q86VN1	386 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	TET1	Q8NFU7	2136 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	CAGE1	Q8TC20	777 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	PRDM12	Q9H4Q4	367 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	ADAMTS1	Q9UHI8	967 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	ITGA11	Q9UKX5	1188 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	NENF	Q9UMX5	172 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	PCDHA13	Q9Y5I0	950 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	DLL1	O00548	723 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	OFD1	O75665	1012 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	TUBB4A	P04350	444 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	AKAP5	P24588	427 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	DSC3	Q14574	896 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	BMS1	Q14692	1282 aa	Known RBP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	ZNF699	Q32M78	642 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	LRRC8D	Q7L1W4	858 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	KIAA1328	Q86T90	577 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	FAXDC2	Q96IV6	333 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	ZMAT2	Q96NC0	199 aa	Known RBP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	TRAIP	Q9BWF2	469 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	IFIH1	Q9BYX4	1025 aa	Known RBP	18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	NIF3L1	Q9GZT8	377 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	CXCL16	Q9H2A7	254 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	RNF39	Q9H2S5	420 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	VRTN	Q9H8Y1	702 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	SLC28A3	Q9HAS3	691 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	FAM105A	Q9NUU6	356 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	DPP3	Q9NY33	737 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	CNTN6	Q9UQ52	1028 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	PCDHB2	Q9Y5E7	798 aa		18.72	■□□□□ 0.59
YIPF2-204	ENST00000586748	UNC80	Q8N2C7	3258 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	CYP26A1	O43174	497 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	ITGB3	P05106	788 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	TNNT1	P13805	278 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	MYOG	P15173	224 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	KCNE1	P15382	129 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	SELP	P16109	830 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	ATIC	P31939	592 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	USP8	P40818	1118 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	UBR7	Q8N806	425 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	SLC30A5	Q8TAD4	765 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	APOL6	Q9BWW8	343 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	LZTFL1	Q9NQ48	299 aa		18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	NOCT	Q9UK39	431 aa	Known RBP	18.71	■□□□□ 0.59
YIPF2-204	ENST00000586748	RCCD1	A6NED2	376 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	DDX3X	O00571	662 aa	Known RBP eCLIP	18.7	■□□□□ 0.58	2e-11	■■■■■ 55.6
YIPF2-204	ENST00000586748	STAU1	O95793	577 aa	Known RBP	18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	KRT19	P08727	400 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	ZSCAN20	P17040	1043 aa	Predicted RBP	18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	MAGEA1	P43355	309 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	RBP5	P82980	135 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	ARHGAP29	Q52LW3	1261 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	C10orf76	Q5T2E6	689 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	EPS8L1	Q8TE68	723 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	AGPAT1	Q99943	283 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	LUC7L	Q9NQ29	371 aa	Known RBP	18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	PARP2	Q9UGN5	583 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	NAGPA	Q9UK23	515 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	PTPRS	Q13332	1948 aa		18.7	■□□□□ 0.58
YIPF2-204	ENST00000586748	SMIM28	A0A1B0GU29	152 aa		18.69	■□□□□ 0.58
YIPF2-204	ENST00000586748	PJA2	O43164	708 aa		18.69	■□□□□ 0.58
YIPF2-204	ENST00000586748	MGEA5	O60502	916 aa		18.69	■□□□□ 0.58
YIPF2-204	ENST00000586748	KRT5	P13647	590 aa		18.69	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms