RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
CASC3-208ENST00000583649 ATXN3LQ9H3M9 355 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 FZD8Q9H461 694 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 PDZD7Q9H5P4 517 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 KCNMB3Q9NPA1 279 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 XPNPEP1Q9NQW7 623 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 RGL1Q9NZL6 768 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 CEP72Q9P209 647 aa12.21□□□□□ -0.45
CASC3-208ENST00000583649 WRAP73Q9P2S5 460 aaPredicted RBP12.21□□□□□ -0.45
CASC3-208ENST00000583649 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 I3L4J1 428 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 ACKR2O00590 384 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 TRDMT1O14717 391 aaKnown RBP12.2□□□□□ -0.46
CASC3-208ENST00000583649 EDIL3O43854 480 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 CCNT1O60563 726 aaKnown RBP12.2□□□□□ -0.46
CASC3-208ENST00000583649 RNF40O75150 1001 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 MOSPD3O75425 235 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 XRCC6P12956 609 aaKnown RBP eCLIP12.2□□□□□ -0.46
CASC3-208ENST00000583649 IFNAR1P17181 557 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 XBP1P17861 261 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 WEE1P30291 646 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 BRCC3P46736 316 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 SSRP1Q08945 709 aaKnown RBP12.2□□□□□ -0.46
CASC3-208ENST00000583649 C19orf57Q0VDD7 668 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 PPP2R5AQ15172 486 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 GLRA4Q5JXX5 417 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 GPR158Q5T848 1215 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 CPLX2Q6PUV4 134 aaKnown RBP12.2□□□□□ -0.46
CASC3-208ENST00000583649 C19orf48Q6RUI8 117 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 NEK8Q86SG6 692 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 DEPTORQ8TB45 409 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 ZFYVE19Q96K21 471 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 PPP1R10Q96QC0 940 aaKnown RBP12.2□□□□□ -0.46
CASC3-208ENST00000583649 HHIPQ96QV1 700 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 NACC1Q96RE7 527 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 ESYT1Q9BSJ8 1104 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 CCDC86Q9H6F5 360 aaKnown RBP12.2□□□□□ -0.46
CASC3-208ENST00000583649 EVLQ9UI08 416 aaPredicted RBP12.2□□□□□ -0.46
CASC3-208ENST00000583649 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 ZZEF1O43149 2961 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 COL4A2P08572 1712 aa12.2□□□□□ -0.46
CASC3-208ENST00000583649 FAM221BA6H8Z2 402 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 PODXLO00592 558 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 CDX4O14627 284 aaPredicted RBP12.19□□□□□ -0.46
CASC3-208ENST00000583649 CPLX1O14810 134 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 SLC37A4O43826 429 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 LYPLA2O95372 231 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 LIG1P18858 919 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 MCM4P33991 863 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 EFNA5P52803 228 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 RUNX3Q13761 415 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 VEPH1Q14D04 833 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 TAF12Q16514 161 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 INF2Q27J81 1249 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 COL28A1Q2UY09 1125 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 TSGA10IPQ3SY00 556 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 PMS2CLQ68D20 193 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 CDCA2Q69YH5 1023 aaPredicted RBP12.19□□□□□ -0.46
CASC3-208ENST00000583649 DAGLBQ8NCG7 672 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 TSTD1Q8NFU3 115 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 PIGKQ92643 395 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 SPACA7Q96KW9 195 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 YIPF1Q9Y548 306 aa12.19□□□□□ -0.46
CASC3-208ENST00000583649 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.19□□□□□ -0.46
CASC3-208ENST00000583649 SPAG17Q6Q759 2223 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 SMIM28A0A1B0GU29 152 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 UPK3BL1B0FP48 263 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 UPK3BL2E5RIL1 263 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 NRG2O14511 850 aaPredicted RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 MAP3K13O43283 966 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 USO1O60763 962 aaKnown RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 ALDH1A2O94788 518 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 SLITRK3O94933 977 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 DEXIO95424 95 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 CDC25CP30307 473 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 MAPK8P45983 427 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 DHPSP49366 369 aaPredicted RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 RARRES1P49788 294 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 IRX4P78413 519 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 YWHAHQ04917 246 aaPredicted RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 BFSP1Q12934 665 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 BYSLQ13895 437 aaKnown RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 MRPL58Q14197 206 aaKnown RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 DMC1Q14565 340 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 TRIM61Q5EBN2 209 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 LPCAT2Q7L5N7 544 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 RABEPKQ7Z6M1 372 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 USP37Q86T82 979 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 BRF1Q92994 677 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 EIF2AK1Q9BQI3 630 aaKnown RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 TASP1Q9H6P5 420 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 GKN1Q9NS71 199 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 PCDHA12Q9UN75 941 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 PDCD11Q14690 1871 aaKnown RBP12.18□□□□□ -0.46
CASC3-208ENST00000583649 NID2Q14112 1375 aa12.18□□□□□ -0.46
CASC3-208ENST00000583649 IGF2RP11717 2491 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 PHLPP2Q6ZVD8 1323 aa12.17□□□□□ -0.46
CASC3-208ENST00000583649 ZBTB39O15060 712 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms