RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 SPATA21Q7Z572 469 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ATP8B4Q8TF62 1192 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ACAP3Q96P50 834 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 MTFR1LQ9H019 292 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 THAP2Q9H0W7 228 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ITGA11Q9UKX5 1188 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 DOT1LQ8TEK3 1739 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ARAP2Q8WZ64 1704 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 POU5F1BQ06416 359 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SNX1Q13596 522 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 UGP2Q16851 508 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 MAP7D1Q3KQU3 841 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 FAM182BQ5T319 152 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 PLPPR4Q7Z2D5 763 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 TMC3Q7Z5M5 1100 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ZNF410Q86VK4 478 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SESTD1Q86VW0 696 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SIX6OS1Q8N1H7 587 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ACER1Q8TDN7 264 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SLCO2A1Q92959 643 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 MYCBPQ99417 103 aaPredicted RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 SERPINI1Q99574 410 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 STOML1Q9UBI4 398 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 APOBEC2Q9Y235 224 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 COL1A2P08123 1366 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 RGPD5Q99666 1765 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 FSCN2O14926 492 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 STRNO43815 780 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 HUS1O60921 280 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SNUPNO95149 360 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 HADHAP40939 763 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 BCAR1P56945 870 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 IFRD2Q12894 506 aaPredicted RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 UAP1Q16222 522 aaPredicted RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 ATF7IP2Q5U623 682 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 PIP4K2CQ8TBX8 421 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 TBC1D31Q96DN5 1066 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SAAL1Q96ER3 474 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 CYFIP2Q96F07 1278 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 MAGEB18Q96M61 343 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 AGBL1Q96MI9 1066 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 NUDT12Q9BQG2 462 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 VTA1Q9NP79 307 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 RPTORQ8N122 1335 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 IGLV3-22A0A075B6J6 115 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 COPEO14579 308 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 APOL1O14791 398 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 TM9SF1O15321 606 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ADCY3O60266 1144 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 H2AFYO75367 372 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 PAMP19021 973 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 HMGCS2P54868 508 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SNAP25P60880 206 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 NUGGCQ68CJ6 796 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SV2AQ7L0J3 742 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 RIOX2Q8IUF8 465 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 IQCKQ8N0W5 287 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 NLRP7Q8WX94 980 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ATG4CQ96DT6 458 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SLC10A4Q96EP9 437 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 SPATA33Q96N06 139 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 RBM15Q96T37 977 aaKnown RBP eCLIP6.17□□□□□ -1.42
RTTN-209ENST00000583043 WWP1Q9H0M0 922 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 PORCNQ9H237 461 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 ZCCHC17Q9NP64 241 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 BAIAP2L1Q9UHR4 511 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 UBQLN1Q9UMX0 589 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 MTO1Q9Y2Z2 717 aaKnown RBP6.17□□□□□ -1.42
RTTN-209ENST00000583043 ZNF831Q5JPB2 1677 aa6.17□□□□□ -1.42
RTTN-209ENST00000583043 CCT8L1PA6NM43 557 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 F8W8V4 182 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 FBXO21O94952 628 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TTC4O95801 387 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 APOA4P06727 396 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 DPEP1P16444 411 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PPATQ06203 517 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CXCL9Q07325 125 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TRADDQ15628 312 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 LRRC31Q6UY01 552 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 MYCBPAPQ8TBZ2 947 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 RNF34Q969K3 372 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 NT5C1AQ9BXI3 368 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 UBXN6Q9BZV1 441 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 ZWILCHQ9H900 591 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 EHD2Q9NZN4 543 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 THEGQ9P2T0 379 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 DERAQ9Y315 318 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 LTBP3Q9NS15 1303 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 E7ENQ6 273 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TGFB1I1O43294 461 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 PIGRP01833 764 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 SKIP12755 728 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 TGM2P21980 687 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CHRNA5P30532 468 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CASP4P49662 377 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 NOL9Q5SY16 702 aaKnown RBP6.16□□□□□ -1.42
RTTN-209ENST00000583043 CATSPER4Q7RTX7 472 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 CRLF3Q8IUI8 442 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 FNIP1Q8TF40 1166 aa6.16□□□□□ -1.42
RTTN-209ENST00000583043 AFG1LQ8WV93 481 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms