RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	MLLT3	P42568	568 aa	Predicted RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	DUSP3	P51452	185 aa	Predicted RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	HSD17B4	P51659	736 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	INSM1	Q01101	510 aa	Predicted RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	LTB	Q06643	244 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	DSC1	Q08554	894 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	RAB33A	Q14088	237 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	PGM5	Q15124	567 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	SF3A1	Q15459	793 aa	Known RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	GNPTAB	Q3T906	1256 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	PPP4R3B	Q5MIZ7	849 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	SYCP2L	Q5T4T6	812 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	CTR9	Q6PD62	1173 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	STOX1	Q6ZVD7	989 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	PDZD4	Q76G19	769 aa	Predicted RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	SV2A	Q7L0J3	742 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	HEATR4	Q86WZ0	1026 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	MCF2L2	Q86YR7	1114 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	COLGALT2	Q8IYK4	626 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	TRIML1	Q8N9V2	468 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	TTC8	Q8TAM2	541 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	SMARCC2	Q8TAQ2	1214 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	URGCP	Q8TCY9	931 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	TBC1D5	Q92609	795 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	HDAC11	Q96DB2	347 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	TCTN2	Q96GX1	697 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	ZFYVE19	Q96K21	471 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	ZFR	Q96KR1	1074 aa	Known RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	HEXIM2	Q96MH2	286 aa	Known RBP	5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	SLITRK1	Q96PX8	696 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	SMARCAD1	Q9H4L7	1026 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	TPCN1	Q9ULQ1	816 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	PCDHB1	Q9Y5F3	818 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	PKDREJ	Q9NTG1	2253 aa		5.68	□□□□□ -1.5
MSI2-216	ENST00000582772	TCRBV5S4A2T	A0A5A2	114 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	GRID2	O43424	1007 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	KCNAB3	O43448	404 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	PPP1R37	O75864	691 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.67	□□□□□ -1.5	1e-24	■□□□□ 11.3
MSI2-216	ENST00000582772	EIF4B	P23588	611 aa	Known RBP	5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	WEE1	P30291	646 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	SLC6A4	P31645	630 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	NOV	P48745	357 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	RAB27A	P51159	221 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	ST3GAL1	Q11201	340 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	SKOR2	Q2VWA4	1001 aa	Predicted RBP	5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	ZSCAN23	Q3MJ62	389 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	HSF5	Q4G112	596 aa	Predicted RBP	5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	SBK1	Q52WX2	424 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	WDR45B	Q5MNZ6	344 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	RTP2	Q5QGT7	225 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	FUT10	Q6P4F1	479 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	TMEM92	Q6UXU6	159 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	CLEC14A	Q86T13	490 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	TTC13	Q8NBP0	860 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	NEDD1	Q8NHV4	660 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	FOXJ1	Q92949	421 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	CENPT	Q96BT3	561 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	B3GALT6	Q96L58	329 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	FAM83C	Q9BQN1	747 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	GPR62	Q9BZJ7	368 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	DLL4	Q9NR61	685 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	MAP3K20	Q9NYL2	800 aa	Known RBP	5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	ADAMTS1	Q9UHI8	967 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	ERRFI1	Q9UJM3	462 aa	Predicted RBP	5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	INPP5F	Q9Y2H2	1132 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	PCDHA1	Q9Y5I3	950 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	CROCC	Q5TZA2	2017 aa		5.67	□□□□□ -1.5
MSI2-216	ENST00000582772	MGAM2	Q2M2H8	2515 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	IGHV1OR15-9	A0A0B4J2B8	117 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	GSTTP1	A0A1W2PQM5	241 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	OTOL1	A6NHN0	477 aa	Predicted RBP	5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	MEIS3P2	A8K0S8	358 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	FIBP	O43427	364 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	PRKAB2	O43741	272 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	IFIT2	P09913	472 aa	Known RBP	5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	FOSL1	P15407	271 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	PDE6A	P16499	860 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	CAPN3	P20807	821 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	SLC16A2	P36021	539 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	MCM2	P49736	904 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	CCT8	P50990	548 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	GALK1	P51570	392 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	USP11	P51784	963 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	FOSB	P53539	338 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	POLE2	P56282	527 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	DDX10	Q13206	875 aa	Known RBP	5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	CDCP2	Q5VXM1	449 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	CATIP	Q7Z7H3	387 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	CDH24	Q86UP0	819 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	IL31RA	Q8NI17	732 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	LNX1	Q8TBB1	728 aa	Predicted RBP	5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	TRAPPC12	Q8WVT3	735 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	LPP	Q93052	612 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	SLC46A1	Q96NT5	459 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	MTMR9	Q96QG7	549 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	CORO1B	Q9BR76	489 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	HPS4	Q9NQG7	708 aa		5.66	□□□□□ -1.5
MSI2-216	ENST00000582772	PRG3	Q9Y2Y8	225 aa	Predicted RBP	5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms