RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 SCRN1Q12765 414 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 RNF19BQ6ZMZ0 732 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 KBTBD6Q86V97 674 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 ARID3BQ8IVW6 561 aaPredicted RBP13.96□□□□□ -0.17
SS18-219ENST00000581570 CEP120Q8N960 986 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 APPL2Q8NEU8 664 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 TNFRSF25Q93038 417 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 IFT74Q96LB3 600 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 ZMAT2Q96NC0 199 aaKnown RBP13.96□□□□□ -0.17
SS18-219ENST00000581570 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 BRMS1Q9HCU9 246 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 GTSE1Q9NYZ3 720 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 TNFSF13BQ9Y275 285 aa13.96□□□□□ -0.17
SS18-219ENST00000581570 C1QTNF9BB2RNN3 333 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 K7ERI5 159 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 DPYSL4O14531 572 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 EXTL3O43909 919 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 REC8O95072 547 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 C1QTNF9P0C862 333 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 CCDC192P0DO97 292 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 KCNE1P15382 129 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 MARCKSP29966 332 aaPredicted RBP13.95□□□□□ -0.18
SS18-219ENST00000581570 MCM4P33991 863 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 CCINQ13939 588 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 PLA2G2CQ5R387 149 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 UNQ6494/PRO21346Q6UXR6 183 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 HAUS6Q7Z4H7 955 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 DDX12PQ92771 950 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 ZFYVE19Q96K21 471 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 SUSD3Q96L08 255 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 POLR3CQ9BUI4 534 aaPredicted RBP13.95□□□□□ -0.18
SS18-219ENST00000581570 LRRC3Q9BY71 257 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 SMOC1Q9H4F8 434 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 PDRG1Q9NUG6 133 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 ZMIZ1Q9ULJ6 1067 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 YIPF1Q9Y548 306 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 PCDHGA5Q9Y5G8 931 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 TICRRQ7Z2Z1 1910 aa13.95□□□□□ -0.18
SS18-219ENST00000581570 CHD6Q8TD26 2715 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 CCDC163A0A0D9SF12 145 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 WNT7AO00755 349 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
SS18-219ENST00000581570 PLD1Q13393 1074 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 RNF43Q68DV7 783 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 TMC8Q8IU68 726 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 WASF1Q92558 559 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 C18orf25Q96B23 403 aaPredicted RBP13.94□□□□□ -0.18
SS18-219ENST00000581570 TBC1D32Q96NH3 1257 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 ACAP3Q96P50 834 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 LRRC3BQ96PB8 259 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 CDT1Q9H211 546 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 ORC3Q9UBD5 711 aaPredicted RBP13.94□□□□□ -0.18
SS18-219ENST00000581570 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
SS18-219ENST00000581570 RALGAPA1Q6GYQ0 2036 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 MPLP40238 635 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 ALDH1A3P47895 512 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
SS18-219ENST00000581570 NOVA1P51513 510 aaKnown RBP13.93□□□□□ -0.18
SS18-219ENST00000581570 EPHB3P54753 998 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 ZNF568Q3ZCX4 644 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 STXBP5Q5T5C0 1151 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 PKN3Q6P5Z2 889 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 KDF1Q8NAX2 398 aaPredicted RBP13.93□□□□□ -0.18
SS18-219ENST00000581570 BEST2Q8NFU1 509 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 KIFAP3Q92845 792 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 PGLYRP2Q96PD5 576 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 ACO2Q99798 780 aaKnown RBP13.93□□□□□ -0.18
SS18-219ENST00000581570 ATXN3LQ9H3M9 355 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 VPS45Q9NRW7 570 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 OBP2AQ9NY56 170 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 CNTN3Q9P232 1028 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 SLC8A2Q9UPR5 921 aa13.93□□□□□ -0.18
SS18-219ENST00000581570 BTBD18B2RXH4 712 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 PFKFB2O60825 505 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 ATG13O75143 517 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 AKAP3O75969 853 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 CTDNEP1O95476 244 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 OR4Q2P0C623 313 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 RPA1P27694 616 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 PLCB2Q00722 1185 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 TNK2Q07912 1038 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 DUSP4Q13115 394 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 GPR158Q5T848 1215 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 ERMNQ8TAM6 284 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 BPIFB1Q8TDL5 484 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 ZC3H10Q96K80 434 aaKnown RBP13.92□□□□□ -0.18
SS18-219ENST00000581570 TMEM209Q96SK2 561 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 TCHPQ9BT92 498 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 MKNK1Q9BUB5 465 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 DNAJC25Q9H1X3 360 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 PTPRHQ9HD43 1115 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 TPCN1Q9ULQ1 816 aa13.92□□□□□ -0.18
SS18-219ENST00000581570 CCDC169A6NNP5 214 aa13.91□□□□□ -0.18
SS18-219ENST00000581570 GIPC1O14908 333 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms