RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TK2O00142 265 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 EML1O00423 815 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 OPHN1O60890 802 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 ARSAP15289 507 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 ITPKAP23677 461 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 GALK1P51570 392 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 CDR1P51861 262 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 SYT13Q7L8C5 426 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 LRRC3Q9BY71 257 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 FBXL5Q9UKA1 691 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 GDAQ9Y2T3 454 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 YIPF1Q9Y548 306 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 PTPN13Q12923 2485 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 FAM149AA5PLN7 773 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 HIP1O00291 1037 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 TRDMT1O14717 391 aaKnown RBP15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 SEC13P55735 322 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 PSMC5P62195 406 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 CYP4F8P98187 520 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 SRSF1Q07955 248 aaKnown RBP eCLIP15.54■□□□□ 0.086e-8■■■□□ 18.8
CSNK1D-213ENST00000580446 CAPSQ13938 189 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 GPR158Q5T848 1215 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 RNF19BQ6ZMZ0 732 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 NOSTRINQ8IVI9 506 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 MDGA1Q8NFP4 955 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 BPIFB1Q8TDL5 484 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 PLXNB3Q9ULL4 1909 aa15.54■□□□□ 0.08
CSNK1D-213ENST00000580446 KIF26AQ9ULI4 1882 aaPredicted RBP15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 TRABD2BA6NFA1 517 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 TDP2O95551 362 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 CFHR1Q03591 330 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 MAPK6Q16659 721 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 PCSK4Q6UW60 755 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 SYT12Q8IV01 421 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 PGLYRP2Q96PD5 576 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 DNAJC25Q9H1X3 360 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 CRISPLD1Q9H336 500 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 ATXN3LQ9H3M9 355 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 XPNPEP1Q9NQW7 623 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 PCDHB9Q9Y5E1 797 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 STK24Q9Y6E0 443 aa15.53■□□□□ 0.08
CSNK1D-213ENST00000580446 MAP3K13O43283 966 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 SOAT2O75908 522 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 OR4Q2P0C623 313 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 KRT10P13645 584 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 CTXN3Q4LDR2 81 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 SLC23A3Q6PIS1 610 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 B3GNT9Q6UX72 402 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 GAREM2Q75VX8 874 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 LPCAT2Q7L5N7 544 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 CCDC33Q8N5R6 958 aa15.52■□□□□ 0.08
CSNK1D-213ENST00000580446 THADAQ6YHU6 1953 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 A0A1B0GUA9 196 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 GOLGA8CPA6NN73 597 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 VNN2O95498 520 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 HNRNPLP14866 589 aaKnown RBP eCLIP15.51■□□□□ 0.072e-7■■■■■ 32.8
CSNK1D-213ENST00000580446 MCM5P33992 734 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 RFC5P40937 340 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 MCM2P49736 904 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 GFPT1Q06210 699 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 SOX4Q06945 474 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 RUNX3Q13761 415 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 RTN1Q16799 776 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 XKR9Q5GH70 373 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 LYSMD4Q5XG99 296 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 TOGARAM2Q6ZUX3 1019 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 RDM1Q8NG50 284 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 RIN3Q8TB24 985 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 FCRL3Q96P31 734 aaPredicted RBP15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 MTRQ99707 1265 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 ARID3AQ99856 593 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 P2RY13Q9BPV8 354 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 GPR88Q9GZN0 384 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 GLT8D2Q9H1C3 349 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 PRORYQ9H606 182 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 CCL26Q9Y258 94 aa15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 TEP1Q99973 2627 aaKnown RBP15.51■□□□□ 0.07
CSNK1D-213ENST00000580446 TNFRSF10BO14763 440 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 CPB1P15086 417 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 PLCB2Q00722 1185 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 KCNC4Q03721 635 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 UPP1Q16831 310 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 C2orf27AQ580R0 203 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 NAXDQ8IW45 347 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 SCUBE3Q8IX30 993 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 TMEM130Q8N3G9 435 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 LEMD2Q8NC56 503 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 TTC16Q8NEE8 873 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 TCP11Q8WWU5 503 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 TMEM87BQ96K49 555 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 TCEANC2Q96MN5 208 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 FAM83CQ9BQN1 747 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 PDZD7Q9H5P4 517 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 POLMQ9NP87 494 aaPredicted RBP15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 IGSF5Q9NSI5 407 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 PILRBQ9UKJ0 227 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 BRPF3Q9ULD4 1205 aa15.5■□□□□ 0.07
CSNK1D-213ENST00000580446 TMEM189-UBE2V1I3L0A0 370 aa15.49■□□□□ 0.07
CSNK1D-213ENST00000580446 ASAP2O43150 1006 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms