RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 BRF1Q92994 677 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 TCEAL3Q969E4 200 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 ACDQ96AP0 544 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 EIF2AK1Q9BQI3 630 aaKnown RBP9.52□□□□□ -0.89
SMG1-216ENST00000569122 CCDC94Q9BW85 323 aaPredicted RBP9.52□□□□□ -0.89
SMG1-216ENST00000569122 C2orf42Q9NWW7 574 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 GTSE1Q9NYZ3 720 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 CEP72Q9P209 647 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 GDAQ9Y2T3 454 aa9.52□□□□□ -0.89
SMG1-216ENST00000569122 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.52□□□□□ -0.89
SMG1-216ENST00000569122 SMIM28A0A1B0GU29 152 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 A0A1W2PRU2 124 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 FAM221BA6H8Z2 402 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 PODXLO00592 558 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 TRDMT1O14717 391 aaKnown RBP9.51□□□□□ -0.89
SMG1-216ENST00000569122 CPLX1O14810 134 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 ZBTB39O15060 712 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 CPB1P15086 417 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 GJA1P17302 382 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 GBP1P32455 592 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 BRCC3P46736 316 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 MCM2P49736 904 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 RARRES1P49788 294 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 SYT13Q7L8C5 426 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 CYP2U1Q7Z449 544 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 ITIH5Q86UX2 942 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 PROSER1Q86XN7 944 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 DEPTORQ8TB45 409 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 HSD17B14Q9BPX1 270 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 NUSAP1Q9BXS6 441 aaKnown RBP9.51□□□□□ -0.89
SMG1-216ENST00000569122 ATXN3LQ9H3M9 355 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 EVLQ9UI08 416 aaPredicted RBP9.51□□□□□ -0.89
SMG1-216ENST00000569122 PCDHA12Q9UN75 941 aa9.51□□□□□ -0.89
SMG1-216ENST00000569122 IGF2RP11717 2491 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 UPK3BL1B0FP48 263 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 UPK3BL2E5RIL1 263 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 I3L4J1 428 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 NRG2O14511 850 aaPredicted RBP9.5□□□□□ -0.89
SMG1-216ENST00000569122 CDX4O14627 284 aaPredicted RBP9.5□□□□□ -0.89
SMG1-216ENST00000569122 HYAL3O43820 417 aaPredicted RBP9.5□□□□□ -0.89
SMG1-216ENST00000569122 USO1O60763 962 aaKnown RBP9.5□□□□□ -0.89
SMG1-216ENST00000569122 SEC24BO95487 1268 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 ATP2B1P20020 1258 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 NAMPTP43490 491 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 ZNF423Q2M1K9 1284 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 UAP1L1Q3KQV9 507 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 SOWAHCQ53LP3 525 aaPredicted RBP9.5□□□□□ -0.89
SMG1-216ENST00000569122 GLRA4Q5JXX5 417 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 BLOC1S2Q6QNY1 142 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 CD300LGQ6UXG3 332 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 PDZD3Q86UT5 571 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 HDDC3Q8N4P3 179 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 DEFB124Q8NES8 71 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 TTC8Q8TAM2 541 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 HAS1Q92839 578 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 SUSD3Q96L08 255 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 GCNAQ96QF7 691 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 MKNK1Q9BUB5 465 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 TASP1Q9H6P5 420 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 HSFX1Q9UBD0 423 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 GPSM3Q9Y4H4 160 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 YIPF1Q9Y548 306 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 PHLPP2Q6ZVD8 1323 aa9.5□□□□□ -0.89
SMG1-216ENST00000569122 OR6C75A6NL08 312 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 RNF40O75150 1001 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 TOP3BO95985 862 aaKnown RBP9.49□□□□□ -0.89
SMG1-216ENST00000569122 KCNE1P15382 129 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 PSMA5P28066 241 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 CDC25CP30307 473 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 MCM4P33991 863 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 DGKEP52429 567 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 ATXN3P54252 364 aaPredicted RBP9.49□□□□□ -0.89
SMG1-216ENST00000569122 SIM1P81133 766 aaPredicted RBP9.49□□□□□ -0.89
SMG1-216ENST00000569122 YWHAHQ04917 246 aaPredicted RBP9.49□□□□□ -0.89
SMG1-216ENST00000569122 RUNX3Q13761 415 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 XKR4Q5GH76 650 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 WDR44Q5JSH3 913 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 GPR158Q5T848 1215 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 ATF7IP2Q5U623 682 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 PMS2CLQ68D20 193 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 LMBRD2Q68DH5 695 aaPredicted RBP9.49□□□□□ -0.89
SMG1-216ENST00000569122 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
SMG1-216ENST00000569122 DNAJB7Q7Z6W7 309 aaPredicted RBP9.49□□□□□ -0.89
SMG1-216ENST00000569122 USP37Q86T82 979 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 C3orf58Q8NDZ4 430 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 BEST2Q8NFU1 509 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 DDX12PQ92771 950 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 PSMG2Q969U7 264 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 RSPRY1Q96DX4 576 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 ZFYVE19Q96K21 471 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 HHIPQ96QV1 700 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 GKN1Q9NS71 199 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 PCDHB8Q9UN66 801 aa9.49□□□□□ -0.89
SMG1-216ENST00000569122 FLNBO75369 2602 aaKnown RBP9.48□□□□□ -0.89
SMG1-216ENST00000569122 ALDH1A2O94788 518 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 OAZ2O95190 189 aa9.48□□□□□ -0.89
SMG1-216ENST00000569122 LIG1P18858 919 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms