RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 NELL1Q92832 810 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 FBXL20Q96IG2 436 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 KLHL32Q96NJ5 620 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 CPNE5Q9HCH3 593 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 TDP1Q9NUW8 608 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 CTTNBP2NLQ9P2B4 639 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 SLC17A6Q9P2U8 582 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 ST3GAL5Q9UNP4 418 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 LIMCH1Q9UPQ0 1083 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 TMA7Q9Y2S6 64 aaKnown RBP3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 BAZ1BQ9UIG0 1483 aaKnown RBP3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 SPATA31D1Q6ZQQ2 1576 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 PHLDB1Q86UU1 1377 aa3.38□□□□□ -1.87
SUB1P3-201ENST00000564581 SMARCA4P51532 1647 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 COL3A1P02461 1466 aaPredicted RBP3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 NDUFS2O75306 463 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 SUN1O94901 812 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 HAUS5O94927 633 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 MT-CO1P00395 513 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 CHRM2P08172 466 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 VIL1P09327 827 aaKnown RBP3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 C5AR1P21730 350 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 EDNRBP24530 442 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 HNRNPMP52272 730 aaKnown RBP eCLIP3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 NHLH1Q02575 133 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 ACAP2Q15057 778 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 C3orf36Q3SXR2 165 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 TSTD2Q5T7W7 516 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 RNF219Q5W0B1 726 aaPredicted RBP3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 KAZNQ674X7 775 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 RSPH3Q86UC2 560 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 AMOTL1Q8IY63 956 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 CBARPQ8N350 705 aaPredicted RBP3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 SLC17A8Q8NDX2 589 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 TMIEQ8NEW7 156 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 IFI44Q8TCB0 444 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 DDB2Q92466 427 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 KAT5Q92993 513 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 NAF1Q96HR8 494 aaKnown RBP3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 MED15Q96RN5 788 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 IMPG2Q9BZV3 1241 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 RNF7Q9UBF6 113 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 ARPP21Q9UBL0 812 aaPredicted RBP3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 KDM6BO15054 1643 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 TSPOAP1O95153 1857 aa3.37□□□□□ -1.87
SUB1P3-201ENST00000564581 IFT140Q96RY7 1462 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PRAMEF33A0A0G2JMD5 474 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 A0A1W2PS29 197 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 DNAJC9-AS1A6NH13 148 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 CGB1A6NKQ9 187 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 VWC2LB2RUY7 222 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 ADM5C9JUS6 153 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 INO80B-WBP1J3KQ70 363 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 K7ESF4 209 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PCDHGA12O60330 932 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PRAMEF10O60809 474 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 SRGNP10124 158 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 CDK4P11802 303 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 KCNA2P16389 499 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 SRSF4Q08170 494 aaKnown RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PABPC1LQ4VXU2 614 aaKnown RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PAPD7Q5XG87 772 aaKnown RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 KIAA0895LQ68EN5 471 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 SLC30A10Q6XR72 485 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 ZNF788Q6ZQV5 615 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 CLNKQ7Z7G1 428 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 AMIGO2Q86SJ2 522 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 DDX42Q86XP3 938 aaKnown RBP eCLIP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 SRRM1Q8IYB3 904 aaKnown RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 NLGN4YQ8NFZ3 816 aaPredicted RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 MYCBPAPQ8TBZ2 947 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 DMRTA2Q96SC8 542 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 HEPHQ9BQS7 1158 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 INO80BQ9C086 356 aaPredicted RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 CCDC8Q9H0W5 538 aaPredicted RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 INTS13Q9NVM9 706 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 MRPS18AQ9NVS2 196 aaKnown RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 MKS1Q9NXB0 559 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 SLC5A4Q9NY91 659 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PCDHGA9Q9Y5G4 932 aaKnown RBP3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PCDHGA8Q9Y5G5 932 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PCDHGA7Q9Y5G6 932 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PCDHGA6Q9Y5G7 932 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PCDHGA3Q9Y5H0 932 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 PEG3Q9GZU2 1588 aa3.36□□□□□ -1.87
SUB1P3-201ENST00000564581 ADGRL1O94910 1474 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 MANSC4A6NHS7 340 aaPredicted RBP3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 CCDC154A6NI56 674 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 TRIM75PA6NK02 468 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 E9PLN8 166 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 HTRA2O43464 458 aaPredicted RBP3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 CD1AP06126 327 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 MTHFD1P11586 935 aaKnown RBP3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 PPP3CBP16298 524 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 GRIA3P42263 894 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 WASP42768 502 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 RPS7P62081 194 aaKnown RBP3.35□□□□□ -1.87
SUB1P3-201ENST00000564581 CDC42EP1Q00587 391 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms