RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PRR35P0CG20 571 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 GSPT1P15170 499 aaKnown RBP4.26□□□□□ -1.73
DENND4A-205ENST00000562540 KCNA2P16389 499 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 MGAT2Q10469 447 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 GRM1Q13255 1194 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 ATP2B3Q16720 1220 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 PREPLQ4J6C6 727 aaPredicted RBP4.26□□□□□ -1.73
DENND4A-205ENST00000562540 ZNF626Q68DY1 528 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 KCNK18Q7Z418 384 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 RNF180Q86T96 592 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.26□□□□□ -1.73
DENND4A-205ENST00000562540 MYCBPAPQ8TBZ2 947 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 TTC1Q99614 292 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 TLR10Q9BXR5 811 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 SPC25Q9HBM1 224 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 ADAM21Q9UKJ8 722 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 SBNO2Q9Y2G9 1366 aa4.26□□□□□ -1.73
DENND4A-205ENST00000562540 GCOM1H8Y6P7 765 aaPredicted RBP4.25□□□□□ -1.73
DENND4A-205ENST00000562540 TP73O15350 636 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 KCNAB3O43448 404 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 AMY1AP04745 511 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 DDCP20711 480 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 GATA3P23771 443 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 SSBP2P81877 361 aaPredicted RBP4.25□□□□□ -1.73
DENND4A-205ENST00000562540 SRSF2Q01130 221 aaKnown RBP4.25□□□□□ -1.73
DENND4A-205ENST00000562540 CD300EQ496F6 205 aaPredicted RBP4.25□□□□□ -1.73
DENND4A-205ENST00000562540 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 RASAL3Q86YV0 1011 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 CMIPQ8IY22 773 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 FAM177A1Q8N128 213 aaPredicted RBP4.25□□□□□ -1.73
DENND4A-205ENST00000562540 UBR7Q8N806 425 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 NLGN4YQ8NFZ3 816 aaPredicted RBP4.25□□□□□ -1.73
DENND4A-205ENST00000562540 LMBR1Q8WVP7 490 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 MANSC1Q9H8J5 431 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 PADI4Q9UM07 663 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 NEU2Q9Y3R4 380 aa4.25□□□□□ -1.73
DENND4A-205ENST00000562540 URI1O94763 535 aaPredicted RBP4.24□□□□□ -1.73
DENND4A-205ENST00000562540 VIL1P09327 827 aaKnown RBP4.24□□□□□ -1.73
DENND4A-205ENST00000562540 CPEP16870 476 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 KELP23276 732 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 SCAND1P57086 179 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 TUBA4AP68366 448 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 ZNF844Q08AG5 666 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 STRN3Q13033 797 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 KLF9Q13886 244 aaPredicted RBP4.24□□□□□ -1.73
DENND4A-205ENST00000562540 ETFDHQ16134 617 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 TMEM119Q4V9L6 283 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 DACT2Q5SW24 774 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 C11orf87Q6NUJ2 197 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 DDX46Q7L014 1031 aaKnown RBP4.24□□□□□ -1.73
DENND4A-205ENST00000562540 KRT26Q7Z3Y9 468 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 ZGPATQ8N5A5 531 aaKnown RBP4.24□□□□□ -1.73
DENND4A-205ENST00000562540 B3GALNT2Q8NCR0 500 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 SEMA6DQ8NFY4 1073 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 RPL36ALQ969Q0 106 aaKnown RBP4.24□□□□□ -1.73
DENND4A-205ENST00000562540 ORAI2Q96SN7 254 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 C11orf54Q9H0W9 315 aaPredicted RBP4.24□□□□□ -1.73
DENND4A-205ENST00000562540 NRIP3Q9NQ35 241 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 PCDHGA2Q9Y5H1 932 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 SHROOM4Q9ULL8 1493 aa4.24□□□□□ -1.73
DENND4A-205ENST00000562540 MYBBP1AQ9BQG0 1328 aaKnown RBP4.23□□□□□ -1.73
DENND4A-205ENST00000562540 ANKRD62A6NC57 917 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 AGFG2O95081 481 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 PPP3CBP16298 524 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 SLC5A3P53794 718 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 ZNF782Q6ZMW2 699 aaPredicted RBP4.23□□□□□ -1.73
DENND4A-205ENST00000562540 ADGRG5Q8IZF4 528 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 SNX19Q92543 992 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 DNAJC28Q9NX36 388 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 CTTNBP2NLQ9P2B4 639 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 DNM3Q9UQ16 869 aa4.23□□□□□ -1.73
DENND4A-205ENST00000562540 ZNF521Q96K83 1311 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 LOC105371045A0A1W2PR82 267 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 TRIM38O00635 465 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 TOR1BO14657 336 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 TTLL1O95922 423 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 SLC6A4P31645 630 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 ANXA11P50995 505 aaKnown RBP4.22□□□□□ -1.73
DENND4A-205ENST00000562540 NXPH1P58417 271 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 ATP8B2P98198 1209 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 TFF2Q03403 129 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 ITIH3Q06033 890 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 DYRK1AQ13627 763 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 MORN5Q5VZ52 161 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 AFAP1L2Q8N4X5 818 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 CAMKK1Q8N5S9 505 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 OR2I1PQ8NGU4 316 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 ZNF48Q96MX3 618 aaPredicted RBP4.22□□□□□ -1.73
DENND4A-205ENST00000562540 SEMA4CQ9C0C4 833 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 MCM8Q9UJA3 840 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 TBC1D30Q9Y2I9 924 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 KAT6AQ92794 2004 aa4.22□□□□□ -1.73
DENND4A-205ENST00000562540 CCDC195A0A1B0GUA6 201 aa4.21□□□□□ -1.74
DENND4A-205ENST00000562540 BRINP1O60477 761 aa4.21□□□□□ -1.74
DENND4A-205ENST00000562540 OSMP13725 252 aa4.21□□□□□ -1.74
DENND4A-205ENST00000562540 EPHB2P29323 1055 aa4.21□□□□□ -1.74
DENND4A-205ENST00000562540 CCT4P50991 539 aaKnown RBP4.21□□□□□ -1.74
DENND4A-205ENST00000562540 CTXN1P60606 82 aa4.21□□□□□ -1.74
DENND4A-205ENST00000562540 MC2RQ01718 297 aa4.21□□□□□ -1.74
DENND4A-205ENST00000562540 UTP14CQ5TAP6 766 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms