RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 KCNH7Q9NS40 1196 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 FAM105AQ9NUU6 356 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 HCFC1R1Q9NWW0 138 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 C2orf42Q9NWW7 574 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 GDE1Q9NZC3 331 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 FNIP2Q9P278 1114 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 KANSL3Q9P2N6 904 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 MAD2L2Q9UI95 211 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 KCNH3Q9ULD8 1083 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 PIN4Q9Y237 131 aaKnown RBP5.98□□□□□ -1.45
HERC1-213ENST00000561359 RAXQ9Y2V3 346 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.98□□□□□ -1.45
HERC1-213ENST00000561359 PCNX2A6NKB5 2137 aa5.98□□□□□ -1.45
HERC1-213ENST00000561359 COL12A1Q99715 3063 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 DDX39AO00148 427 aaKnown RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 MEIS2O14770 477 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 MAGEB2O15479 319 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 RHOBTB1O94844 696 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 MICAL2O94851 1124 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 ATG7O95352 703 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 NFKB1P19838 968 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 HOXA9P31269 272 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 RAB27AP51159 221 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 GPC3P51654 580 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 ARSDP51689 593 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 AFF1P51825 1210 aaKnown RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 CREMQ03060 361 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 ELOAQ14241 798 aaKnown RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 SLC35G1Q2M3R5 365 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 USP41Q3LFD5 358 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 SWSAP1Q6NVH7 229 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 KRT25Q7Z3Z0 450 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 CCDC60Q8IWA6 550 aaPredicted RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 IFT43Q96FT9 208 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 ZC3H10Q96K80 434 aaKnown RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 SPOCK3Q9BQ16 436 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 TRAIPQ9BWF2 469 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 GCOM2Q9BZD3 368 aaPredicted RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 RIOX1Q9H6W3 641 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 RSAD1Q9HA92 442 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 ZNF334Q9HCZ1 680 aaPredicted RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 CHST7Q9NS84 486 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 MARCH5Q9NX47 278 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 FBXW11Q9UKB1 542 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 CEP131Q9UPN4 1083 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 BAZ2BQ9UIF8 2168 aaKnown RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 NFASCO94856 1347 aa5.97□□□□□ -1.45
HERC1-213ENST00000561359 ASCC3Q8N3C0 2202 aaKnown RBP5.97□□□□□ -1.45
HERC1-213ENST00000561359 EVPLQ92817 2033 aa5.96□□□□□ -1.45
HERC1-213ENST00000561359 SPTAN1Q13813 2472 aaKnown RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 IGKV6D-21A0A0A0MT36 114 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 BCLAF3A2AJT9 711 aaKnown RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 FAM221BA6H8Z2 402 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 F8W810 466 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CDX4O14627 284 aaPredicted RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 ZNF213O14771 459 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 ZNF263O14978 683 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CYTH3O43739 400 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 EXTL3O43909 919 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 ZNF623O75123 536 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 AKAP3O75969 853 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CCNE2O96020 404 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 ALBP02768 609 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CEBPBP17676 345 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 PSMC3P17980 439 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 SFPQP23246 707 aaKnown RBP eCLIP5.96□□□□□ -1.46
HERC1-213ENST00000561359 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 ITGB3BPQ13352 177 aaPredicted RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 MCMDC2Q4G0Z9 681 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 PRRT3Q5FWE3 981 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 DGKKQ5KSL6 1271 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 MIS18BP1Q6P0N0 1132 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 PRSS55Q6UWB4 352 aaPredicted RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 ABHD15Q6UXT9 468 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 AGMOQ6ZNB7 445 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CATSPER4Q7RTX7 472 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 MAP4K3Q8IVH8 894 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 RNF168Q8IYW5 571 aaPredicted RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 SLC7A14Q8TBB6 771 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 MDM1Q8TC05 714 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CSGALNACT1Q8TDX6 532 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 TRIM11Q96F44 468 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 MYO19Q96H55 970 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CRELD1Q96HD1 420 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 MBOAT7Q96N66 472 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 MXRA8Q9BRK3 442 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 COLEC11Q9BWP8 271 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 APOL6Q9BWW8 343 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 GPR62Q9BZJ7 368 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 GSX2Q9BZM3 304 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 CLMPQ9H6B4 373 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 PSTPIP2Q9H939 334 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 TRPV5Q9NQA5 729 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 HELLSQ9NRZ9 838 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 ZSWIM5Q9P217 1185 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 DNMT3BQ9UBC3 853 aaKnown RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 DMGDHQ9UI17 866 aaKnown RBP5.96□□□□□ -1.46
HERC1-213ENST00000561359 SLC8A2Q9UPR5 921 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 PCDHB2Q9Y5E7 798 aa5.96□□□□□ -1.46
HERC1-213ENST00000561359 TEP1Q99973 2627 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms