RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 CTXN3Q4LDR2 81 aa12.99□□□□□ -0.33
IVD-212ENST00000560660 PDZD3Q86UT5 571 aa12.99□□□□□ -0.33
IVD-212ENST00000560660 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
IVD-212ENST00000560660 ADPGKQ9BRR6 497 aa12.99□□□□□ -0.33
IVD-212ENST00000560660 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
IVD-212ENST00000560660 INVSQ9Y283 1065 aa12.99□□□□□ -0.33
IVD-212ENST00000560660 GPSM3Q9Y4H4 160 aa12.99□□□□□ -0.33
IVD-212ENST00000560660 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 EML5Q05BV3 1969 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 IFNAR1P17181 557 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 CCT2P78371 535 aaKnown RBP12.98□□□□□ -0.33
IVD-212ENST00000560660 IRX4P78413 519 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 SOX4Q06945 474 aaPredicted RBP12.98□□□□□ -0.33
IVD-212ENST00000560660 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
IVD-212ENST00000560660 MRPL58Q14197 206 aaKnown RBP12.98□□□□□ -0.33
IVD-212ENST00000560660 FAM187BQ17R55 369 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 ITPRIPL2Q3MIP1 535 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 EEF1DP3Q658K8 133 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 PPP4R3AQ6IN85 833 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 FSTL4Q6MZW2 842 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 RNF19BQ6ZMZ0 732 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 PROSER1Q86XN7 944 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 ZBTB8OSQ8IWT0 167 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 LRRC3Q9BY71 257 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 ANKEF1Q9NU02 776 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 AFF4Q9UHB7 1163 aaKnown RBP12.98□□□□□ -0.33
IVD-212ENST00000560660 FREM2Q5SZK8 3169 aa12.98□□□□□ -0.33
IVD-212ENST00000560660 ARID2Q68CP9 1835 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 SMIM28A0A1B0GU29 152 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 SPAARA0A1B0GVQ0 90 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 SYN3O14994 580 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 CCNT1O60563 726 aaKnown RBP12.97□□□□□ -0.33
IVD-212ENST00000560660 USO1O60763 962 aaKnown RBP12.97□□□□□ -0.33
IVD-212ENST00000560660 RNF40O75150 1001 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 SEC24BO95487 1268 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
IVD-212ENST00000560660 COL28A1Q2UY09 1125 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 TMEM196Q5HYL7 178 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 PIGOQ8TEQ8 1089 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 EIF2AK1Q9BQI3 630 aaKnown RBP12.97□□□□□ -0.33
IVD-212ENST00000560660 SLC32A1Q9H598 525 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 NCOA5Q9HCD5 579 aaKnown RBP12.97□□□□□ -0.33
IVD-212ENST00000560660 NUB1Q9Y5A7 615 aa12.97□□□□□ -0.33
IVD-212ENST00000560660 KIF26AQ9ULI4 1882 aaPredicted RBP12.96□□□□□ -0.33
IVD-212ENST00000560660 ACKR2O00590 384 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 PODXLO00592 558 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
IVD-212ENST00000560660 EGFP01133 1207 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 EDN1P05305 212 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 CPB1P15086 417 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 RARRES1P49788 294 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 SIM1P81133 766 aaPredicted RBP12.96□□□□□ -0.33
IVD-212ENST00000560660 PLCB2Q00722 1185 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 KRT32Q14532 448 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 KARSQ15046 597 aaKnown RBP12.96□□□□□ -0.33
IVD-212ENST00000560660 PTPAQ15257 358 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 NPY5RQ15761 445 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 MAPK6Q16659 721 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 GPR158Q5T848 1215 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 CDCA2Q69YH5 1023 aaPredicted RBP12.96□□□□□ -0.33
IVD-212ENST00000560660 KRT25Q7Z3Z0 450 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 TMC8Q8IU68 726 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 BPIFB1Q8TDL5 484 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 YTHDC1Q96MU7 727 aaKnown RBP12.96□□□□□ -0.33
IVD-212ENST00000560660 HSD17B14Q9BPX1 270 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 MKNK1Q9BUB5 465 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 ATXN3LQ9H3M9 355 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 FBRSL1Q9HCM7 1045 aaKnown RBP12.96□□□□□ -0.33
IVD-212ENST00000560660 ANKFY1Q9P2R3 1169 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 MAFFQ9ULX9 164 aa12.96□□□□□ -0.33
IVD-212ENST00000560660 NID2Q14112 1375 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 IGSF10Q6WRI0 2623 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 EIF4E1BA6NMX2 242 aaKnown RBP12.95□□□□□ -0.34
IVD-212ENST00000560660 LYPLA2O95372 231 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 BAG4O95429 457 aaKnown RBP12.95□□□□□ -0.34
IVD-212ENST00000560660 CAPNS1P04632 268 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 DGKEP52429 567 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 EPHB3P54753 998 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
IVD-212ENST00000560660 ZNF280DQ6N043 979 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 NEK8Q86SG6 692 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 TRIM22Q8IYM9 498 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 CHCHD4Q8N4Q1 142 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 DAGLBQ8NCG7 672 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 AIFM3Q96NN9 605 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 PGLYRP2Q96PD5 576 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 BBC3Q96PG8 261 aaPredicted RBP12.95□□□□□ -0.34
IVD-212ENST00000560660 DNAJC25Q9H1X3 360 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 C2orf40Q9H1Z8 148 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 GKN1Q9NS71 199 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 THG1LQ9NWX6 298 aaKnown RBP12.95□□□□□ -0.34
IVD-212ENST00000560660 OBP2AQ9NY56 170 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 YIPF1Q9Y548 306 aa12.95□□□□□ -0.34
IVD-212ENST00000560660 ABCA7Q8IZY2 2146 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 CCDC194A0A1B0GVG4 234 aa12.94□□□□□ -0.34
IVD-212ENST00000560660 OTOL1A6NHN0 477 aaPredicted RBP12.94□□□□□ -0.34
IVD-212ENST00000560660 TRDMT1O14717 391 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms