RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 A0A087WZ62 844 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 A0A0B4J269 797 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 A6NHS1 94 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 BECN2A8MW95 431 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 GOLGA6L19H0YKK7 550 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 KLF4O43474 513 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 B4GALT3O60512 393 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 MFAP3LO75121 409 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 TBCAO75347 108 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 KRT18P05783 430 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 ARAFP10398 606 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 PCSK2P16519 638 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 EEF1GP26641 437 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 PON1P27169 355 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 CNGA1P29973 690 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 AFF1P51825 1210 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 GUCY2FP51841 1108 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 JAM2P57087 298 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 PTENP60484 403 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 FKBP3Q00688 224 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 SP3Q02447 781 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 MGAT3Q09327 533 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 TMEM62Q0P6H9 643 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 ADAM9Q13443 819 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 GRIK4Q16099 956 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 MAN2A1Q16706 1144 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 IQCEQ6IPM2 695 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 EFCAB12Q6NXP0 572 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 TRIM65Q6PJ69 517 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 CXCL17Q6UXB2 119 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 MSL3Q8N5Y2 521 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 ARRDC4Q8NCT1 418 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 LRRN4CLQ8ND94 238 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 GPR152Q8TDT2 470 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 CCDC74AQ96AQ1 378 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 MFSD14AQ96MC6 490 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 CEP63Q96MT8 703 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 DNAJC7Q99615 494 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 ACO2Q99798 780 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 FDXACB1Q9BRP7 624 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 DESI2Q9BSY9 194 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 NDST4Q9H3R1 872 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 APOBEC3GQ9HC16 384 aaKnown RBP6.37□□□□□ -1.39
ATXN3-230ENST00000554673 NEUROD4Q9HD90 331 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 ACP6Q9NPH0 428 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 SPTLC3Q9NUV7 552 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 HSPBP1Q9NZL4 362 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 KLK14Q9P0G3 267 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 ARHGAP20Q9P2F6 1191 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 TRIM10Q9UDY6 481 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 SALL4Q9UJQ4 1053 aa6.37□□□□□ -1.39
ATXN3-230ENST00000554673 PATJQ8NI35 1801 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 COL4A4P53420 1690 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 A0A1W2PQC6 194 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 FAM170AA1A519 330 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PPEF2O14830 753 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 N4BP3O15049 544 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 HBP1O60381 514 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 MGEA5O60502 916 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 TSPAN1O60635 241 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 DNAJC6O75061 913 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 DUSP11O75319 330 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PPFIA4O75335 1185 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 RPLP1P05386 114 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 USP17L7P0C7H9 530 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 ARF4P18085 180 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 HNRNPH3P31942 346 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 NOS2P35228 1153 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 MAP2K2P36507 400 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 NAMPTP43490 491 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 ACOT2P49753 483 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 GPC3P51654 580 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 POLGP54098 1239 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 CYP24A1Q07973 514 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 MEA1Q16626 185 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 FSCN1Q16658 493 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 RSPO4Q2I0M5 234 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 KIAA0753Q2KHM9 967 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PLEKHG6Q3KR16 790 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SPECC1LQ69YQ0 1117 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PDXDC1Q6P996 788 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 KCNV1Q6PIU1 500 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 TREML1Q86YW5 311 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 ACRBPQ8NEB7 543 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 TAS1R2Q8TE23 839 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 EPS8L3Q8TE67 593 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PARD3BQ8TEW8 1205 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SH3TC2Q8TF17 1288 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 CPLX3Q8WVH0 158 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PSPC1Q8WXF1 523 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SOCS4Q8WXH5 440 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 LINC01599Q8WXQ3 324 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 GLG1Q92896 1179 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 CPB2Q96IY4 423 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 PLVAPQ9BX97 442 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 NAT10Q9H0A0 1025 aaKnown RBP6.36□□□□□ -1.39
ATXN3-230ENST00000554673 TMEM117Q9H0C3 514 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 GBP3Q9H0R5 595 aa6.36□□□□□ -1.39
ATXN3-230ENST00000554673 SDCBP2Q9H190 292 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms