RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 ANKFY1Q9P2R3 1169 aa13.59□□□□□ -0.23
CDK4-214ENST00000552862 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
CDK4-214ENST00000552862 EXOC7Q9UPT5 735 aa13.59□□□□□ -0.23
CDK4-214ENST00000552862 WDR27A2RRH5 827 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 CHADO15335 359 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 TBCAO75347 108 aaKnown RBP13.58□□□□□ -0.24
CDK4-214ENST00000552862 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
CDK4-214ENST00000552862 CENPBP07199 599 aaPredicted RBP13.58□□□□□ -0.24
CDK4-214ENST00000552862 PDIA4P13667 645 aaKnown RBP13.58□□□□□ -0.24
CDK4-214ENST00000552862 PNPLA4P41247 253 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 BRCC3P46736 316 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 MYCT1Q8N699 235 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 CACTINQ8WUQ7 758 aaKnown RBP13.58□□□□□ -0.24
CDK4-214ENST00000552862 FAM3CQ92520 227 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 HVCN1Q96D96 273 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 KIF12Q96FN5 646 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 KXD1Q9BQD3 176 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 KIFC3Q9BVG8 833 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 LRRC27Q9C0I9 530 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 USP34Q70CQ2 3546 aa13.58□□□□□ -0.24
CDK4-214ENST00000552862 TTC26A0AVF1 554 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 WNT7AO00755 349 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 ADAM12O43184 909 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 TRAK2O60296 914 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 DDX6P26196 483 aaKnown RBP eCLIP13.57□□□□□ -0.241e-6■■■■□ 21.2
CDK4-214ENST00000552862 CDC25CP30307 473 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 CXCL12P48061 93 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 NCKAP1LP55160 1127 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 ALCAMQ13740 583 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 SLC10A6Q3KNW5 377 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 OVOS1Q6IE37 1185 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 RALGPS2Q86X27 583 aaPredicted RBP13.57□□□□□ -0.24
CDK4-214ENST00000552862 DCP1BQ8IZD4 617 aaKnown RBP13.57□□□□□ -0.24
CDK4-214ENST00000552862 FOXQ1Q9C009 403 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 EPC1Q9H2F5 836 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 CHRDQ9H2X0 955 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 ZNF334Q9HCZ1 680 aaPredicted RBP13.57□□□□□ -0.24
CDK4-214ENST00000552862 EHD2Q9NZN4 543 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 TBX20Q9UMR3 447 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 C2CD2Q9Y426 696 aa13.57□□□□□ -0.24
CDK4-214ENST00000552862 C2orf16Q68DN1 1984 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 VWA3AA6NCI4 1184 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
CDK4-214ENST00000552862 IL18RAPO95256 599 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 PIGRP01833 764 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 ADRB2P07550 413 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 MYL4P12829 197 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 CDC25AP30304 524 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 GDI1P31150 447 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 DDIT3P35638 169 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 TOB1P50616 345 aaPredicted RBP13.56□□□□□ -0.24
CDK4-214ENST00000552862 PDE6CP51160 858 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 KPNA1P52294 538 aaPredicted RBP13.56□□□□□ -0.24
CDK4-214ENST00000552862 SLC12A3P55017 1021 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 NTHL1P78549 312 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 TWF1Q12792 350 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 ECM1Q16610 540 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 NFE2Q16621 373 aaPredicted RBP13.56□□□□□ -0.24
CDK4-214ENST00000552862 FAM78AQ5JUQ0 283 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 PRSS36Q5K4E3 855 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 LARP1BQ659C4 914 aaKnown RBP13.56□□□□□ -0.24
CDK4-214ENST00000552862 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 DAW1Q8N136 415 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 SPEM1Q8N4L4 309 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 SPATA18Q8TC71 538 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 SPPL2BQ8TCT7 592 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 MSTO1Q9BUK6 570 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 RPP25Q9BUL9 199 aaKnown RBP13.56□□□□□ -0.24
CDK4-214ENST00000552862 RUSC1Q9BVN2 902 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 ST6GALNAC4Q9H4F1 302 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 HCFC1R1Q9NWW0 138 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 UXTQ9UBK9 157 aaPredicted RBP13.56□□□□□ -0.24
CDK4-214ENST00000552862 R4GN57 208 aa13.56□□□□□ -0.24
CDK4-214ENST00000552862 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 HARSP12081 509 aaKnown RBP13.55□□□□□ -0.24
CDK4-214ENST00000552862 HOXA6P31267 233 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 AARSP49588 968 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDK4-214ENST00000552862 SPATA1Q5VX52 437 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 LAIR1Q6GTX8 287 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 CD300LGQ6UXG3 332 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 MAP4K3Q8IVH8 894 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 KIAA2013Q8IYS2 634 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 ZSCAN18Q8TBC5 510 aaPredicted RBP13.55□□□□□ -0.24
CDK4-214ENST00000552862 ING5Q8WYH8 240 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 NELL1Q92832 810 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 ZMAT2Q96NC0 199 aaKnown RBP13.55□□□□□ -0.24
CDK4-214ENST00000552862 RTKNQ9BST9 563 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 LMAN1LQ9HAT1 526 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 GOLGA2P5Q9HBQ8 144 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 DLL3Q9NYJ7 618 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 PCDHB13Q9Y5F0 798 aa13.55□□□□□ -0.24
CDK4-214ENST00000552862 CFAP54Q96N23 3096 aa13.54□□□□□ -0.24
CDK4-214ENST00000552862 CCDC163A0A0D9SF12 145 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms