RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 LILRA4P59901 499 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 YWHAHQ04917 246 aaPredicted RBP19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 PSMD6Q15008 389 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 SMAD2Q15796 467 aaKnown RBP19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 DUOXA2Q1HG44 320 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 SV2CQ496J9 727 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 CTXN3Q4LDR2 81 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 LIN9Q5TKA1 542 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 ZNF658Q5TYW1 1059 aaPredicted RBP19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 LMBRD2Q68DH5 695 aaPredicted RBP19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 WDR49Q8IV35 697 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 SLC9A9Q8IVB4 645 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 SMYD4Q8IYR2 804 aaPredicted RBP19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 PLEKHA4Q9H4M7 779 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 INTS13Q9NVM9 706 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 AGAP1Q9UPQ3 857 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 FRMD4BQ9Y2L6 1034 aa19.95■□□□□ 0.78
PRPF40B-216ENST00000552301 PLXNA3P51805 1871 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 REV3LO60673 3130 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 RPL13P26373 211 aaKnown RBP19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 RBP5P82980 135 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 STIM1Q13586 685 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 MYBPC2Q14324 1141 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 CEP135Q66GS9 1140 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 CSGALNACT2Q8N6G5 542 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 C12orf76Q8N812 135 aaPredicted RBP19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 C1orf127Q8N9H9 656 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 KREMEN2Q8NCW0 462 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 HDAC7Q8WUI4 952 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 SENP8Q96LD8 212 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 RIPOR3Q96MK2 946 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 CGRRF1Q99675 332 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 ADAM7Q9H2U9 754 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 TRAF3IP3Q9Y228 551 aa19.94■□□□□ 0.78
PRPF40B-216ENST00000552301 SPATA31D3P0C874 917 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 TYMPP19971 482 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 NR2F2P24468 414 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 MTHFRP42898 656 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 ARPP19P56211 112 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 BFSP1Q12934 665 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 RAB33AQ14088 237 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 TMC5Q6UXY8 1006 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 SPATA31D4Q6ZUB0 917 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 METTL23Q86XA0 190 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 LRRC52Q8N7C0 313 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 SPATA20Q8TB22 786 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 NECTIN4Q96NY8 510 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 NECAB3Q96P71 396 aaPredicted RBP19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 POP1Q99575 1024 aaKnown RBP19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 TSG101Q99816 390 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 OXCT2Q9BYC2 517 aaPredicted RBP19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 S1PR5Q9H228 398 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 DMAC2Q9NW81 257 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 PRKAG3Q9UGI9 489 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 DSEQ9UL01 958 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 TIMM13Q9Y5L4 95 aaPredicted RBP19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 SCN1AP35498 2009 aa19.93■□□□□ 0.78
PRPF40B-216ENST00000552301 GOLGA6L22H0YM25 854 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 SPTLC1O15269 473 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 ADAM12O43184 909 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 CPB1P15086 417 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 SSTR3P32745 418 aaPredicted RBP19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 MYO1EQ12965 1108 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 CBX2Q14781 532 aaPredicted RBP19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 ATAT1Q5SQI0 421 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 OVOS1Q6IE37 1185 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 CLEC17AQ6ZS10 378 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 OR5B17Q8NGF7 314 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 SUSD6Q92537 303 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 FAM84AQ96KN4 292 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 MFSD14AQ96MC6 490 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 FBXL5Q9UKA1 691 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 FBXW11Q9UKB1 542 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 MAN1B1Q9UKM7 699 aa19.92■□□□□ 0.78
PRPF40B-216ENST00000552301 NCOR1O75376 2440 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 TTC28Q96AY4 2481 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 KPNA7A9QM74 516 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 CYB561D2O14569 222 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 CLSTN1O94985 981 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 ELF1P32519 619 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 PPP1R2P41236 205 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 PRCPP42785 496 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 ROR1Q01973 937 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 MRPL58Q14197 206 aaKnown RBP19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 NFIL3Q16649 462 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 SLC8B1Q6J4K2 584 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 LILRA6Q6PI73 481 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 ADHFE1Q8IWW8 467 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 CMASQ8NFW8 434 aaPredicted RBP19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 TMEM174Q8WUU8 243 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 PIDD1Q9HB75 910 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 PTPRJQ12913 1337 aa19.91■□□□□ 0.78
PRPF40B-216ENST00000552301 OR6C75A6NL08 312 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 PSMA7O14818 248 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 PHACTR2O75167 634 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 OAZ2O95190 189 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 C8AP07357 584 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 KRT13P13646 458 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 CASP4P49662 377 aa19.9■□□□□ 0.78
PRPF40B-216ENST00000552301 AP3M2P53677 418 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms