RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 LACTBP83111 547 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-213ENST00000550629 PRR5P85299 388 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 SP3Q02447 781 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 KCTD2Q14681 263 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 KIF22Q14807 665 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 SAFBQ15424 915 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCAF11-213ENST00000550629 USH1GQ495M9 461 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 ANKS3Q6ZW76 656 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 PLEKHH3Q7Z736 793 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 ZNF227Q86WZ6 799 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 FRS2Q8WU20 508 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 SOCS4Q8WXH5 440 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 PIBF1Q8WXW3 757 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 IPO9Q96P70 1041 aaKnown RBP6.53□□□□□ -1.36
SCAF11-213ENST00000550629 MMP19Q99542 508 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 FOXP1Q9H334 677 aaPredicted RBP6.53□□□□□ -1.36
SCAF11-213ENST00000550629 ST7Q9NRC1 585 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 SLC5A4Q9NY91 659 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 CYP39A1Q9NYL5 469 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 VPS54Q9P1Q0 977 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 RIPK3Q9Y572 518 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 ZNF236Q9UL36 1845 aa6.53□□□□□ -1.36
SCAF11-213ENST00000550629 ADAMTS20P59510 1910 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 B4DLN1 442 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 H3BQV1 296 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 NPHS1O60500 1241 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 BUB1BO60566 1050 aaPredicted RBP6.52□□□□□ -1.37
SCAF11-213ENST00000550629 HOXC6P09630 235 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 SYT1P21579 422 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 U2AF2P26368 475 aaKnown RBP eCLIP6.52□□□□□ -1.371e-7■■■□□ 15.1
SCAF11-213ENST00000550629 DDIT3P35638 169 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 PRMT2P55345 433 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 NLRP5P59047 1200 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 GRB14Q14449 540 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 MUM1L1Q5H9M0 696 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 KRT40Q6A162 431 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 XRRA1Q6P2D8 792 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 RNF207Q6ZRF8 634 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 GPR142Q7Z601 462 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 BLIDQ8IZY5 108 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 ANKRD35Q8N283 1001 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
SCAF11-213ENST00000550629 CELF2-AS1Q8N7Q2 184 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 DNERQ8NFT8 737 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 NPLOC4Q8TAT6 608 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 COA7Q96BR5 231 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 ERO1AQ96HE7 468 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 MPHOSPH6Q99547 160 aaKnown RBP6.52□□□□□ -1.37
SCAF11-213ENST00000550629 PORCNQ9H237 461 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 A1CFQ9NQ94 594 aaKnown RBP6.52□□□□□ -1.37
SCAF11-213ENST00000550629 HOMER2Q9NSB8 354 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 RTEL1Q9NZ71 1219 aa6.52□□□□□ -1.37
SCAF11-213ENST00000550629 ADD3Q9UEY8 706 aaKnown RBP6.52□□□□□ -1.37
SCAF11-213ENST00000550629 DBR1Q9UK59 544 aaKnown RBP6.52□□□□□ -1.37
SCAF11-213ENST00000550629 R3HCC1Q9Y3T6 440 aaKnown RBP6.52□□□□□ -1.37
SCAF11-213ENST00000550629 FRMPD4Q14CM0 1322 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 MEIS2O14770 477 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 TNPO2O14787 897 aaKnown RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 STX6O43752 255 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 STAM2O75886 525 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 CFBP00751 764 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 FUCA1P04066 466 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 HOXD10P28358 340 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 KRT2P35908 639 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 PSMC4P43686 418 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 AFF3P51826 1226 aaKnown RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 RPS6P62753 249 aaKnown RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 NUCB2P80303 420 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 BAATQ14032 418 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 SF1Q15637 639 aaKnown RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 NPY5RQ15761 445 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 INF2Q27J81 1249 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 NSMFQ6X4W1 530 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 EEPD1Q7L9B9 569 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 BRAPQ7Z569 592 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 CABP7Q86V35 215 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 NOSTRINQ8IVI9 506 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 DIS3L2Q8IYB7 885 aaKnown RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 FAM133AQ8N9E0 248 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 NSUN6Q8TEA1 469 aaKnown RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 USP33Q8TEY7 942 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 USP6NLQ92738 828 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 DPF3Q92784 378 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 DACT3Q96B18 629 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 AIFM3Q96NN9 605 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 IWS1Q96ST2 819 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 NAP1L4Q99733 375 aaKnown RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 R3HDMLQ9H3Y0 253 aa6.51□□□□□ -1.37
SCAF11-213ENST00000550629 ZSCAN16Q9H4T2 348 aaPredicted RBP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.51□□□□□ -1.37
SCAF11-213ENST00000550629 RPTORQ8N122 1335 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 COL11A1P12107 1806 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-213ENST00000550629 RBBP6Q7Z6E9 1792 aaKnown RBP6.5□□□□□ -1.37
SCAF11-213ENST00000550629 CCDC194A0A1B0GVG4 234 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 ARNTLO00327 626 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 KLF4O43474 513 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 SNRPB2P08579 225 aaKnown RBP6.5□□□□□ -1.37
SCAF11-213ENST00000550629 IGFBP6P24592 240 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-213ENST00000550629 ADORA2AP29274 412 aa6.5□□□□□ -1.37
SCAF11-213ENST00000550629 HOXA13P31271 388 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms