RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 ZNF362Q5T0B9 420 aaPredicted RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ABHD17BQ5VST6 288 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 PAPD7Q5XG87 772 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 EFCAB12Q6NXP0 572 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 TXLNBQ8N3L3 684 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 BOLLQ8N9W6 283 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ZNF610Q8N9Z0 462 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 SMC1BQ8NDV3 1235 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 KIF18AQ8NI77 898 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 MDM1Q8TC05 714 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ERO1AQ96HE7 468 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 CDC5LQ99459 802 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ANO3Q9BYT9 981 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 TMEM260Q9NX78 707 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 CWC15Q9P013 229 aaKnown RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 PRSS50Q9UI38 385 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 USP15Q9Y4E8 981 aaPredicted RBP3.81□□□□□ -1.8
CCNT1-203ENST00000550457 FPGT-TNNI3KV9GXZ4 949 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 MYOM1P52179 1685 aa3.81□□□□□ -1.8
CCNT1-203ENST00000550457 ABCA8O94911 1581 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 ATP10BO94823 1461 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 FAM135BQ49AJ0 1406 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 ABCC4O15439 1325 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 WNT10BO00744 389 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 CCP110O43303 1012 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 HMMRO75330 724 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 ITGA10O75578 1167 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 U2AF1L5P0DN76 240 aaPredicted RBP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 RBP3P10745 1247 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 CYP2C19P33261 490 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 MTHFSP49914 203 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 MMP14P50281 582 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 NEK4P51957 841 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 HNRNPMP52272 730 aaKnown RBP eCLIP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 KPNA1P52294 538 aaPredicted RBP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 MANFP55145 182 aaKnown RBP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 TPM4P67936 248 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 PHC1P78364 1004 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 U2AF1Q01081 240 aaKnown RBP eCLIP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 LMOD3Q0VAK6 560 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 RESTQ13127 1097 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 PCBP1Q15365 356 aaKnown RBP eCLIP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 SEPT7Q16181 437 aaKnown RBP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 C19orf54Q5BKX5 351 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 PASD1Q8IV76 773 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 GLB1L2Q8IW92 636 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 SLC35B2Q8TB61 432 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 TFAP2CQ92754 450 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 KIF1BPQ96EK5 621 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 TMX3Q96JJ7 454 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 GPR101Q96P66 508 aaPredicted RBP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 PLEKHF1Q96S99 279 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 ARGLU1Q9NWB6 273 aaPredicted RBP3.8□□□□□ -1.8
CCNT1-203ENST00000550457 GPRC5DQ9NZD1 345 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 CD2APQ9Y5K6 639 aa3.8□□□□□ -1.8
CCNT1-203ENST00000550457 RGS12O14924 1447 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 NSD3Q9BZ95 1437 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 MAST3O60307 1309 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 AOX1Q06278 1338 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 RPGRIP1LQ68CZ1 1315 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 SHPRHQ149N8 1683 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 CLGNO14967 610 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 ADCY6O43306 1168 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 CFIP05156 583 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 ELANEP08246 267 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 MGAT1P26572 445 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 LSP1P33241 339 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 TNNT3P45378 269 aaPredicted RBP3.79□□□□□ -1.8
CCNT1-203ENST00000550457 CHN2P52757 468 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 GNAI1P63096 354 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 TUBB4BP68371 445 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 RBM6P78332 1123 aaKnown RBP3.79□□□□□ -1.8
CCNT1-203ENST00000550457 MPP3Q13368 585 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 PKP1Q13835 747 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 PRAMEF14Q5SWL7 426 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 AGAP9Q5VTM2 703 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 GPR149Q86SP6 731 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 LRRTM3Q86VH5 581 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 SLC44A3Q8N4M1 653 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 ANKRD44Q8N8A2 993 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 SNX33Q8WV41 574 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 ZNF830Q96NB3 372 aaPredicted RBP3.79□□□□□ -1.8
CCNT1-203ENST00000550457 FUCA2Q9BTY2 467 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 TTC12Q9H892 705 aaPredicted RBP3.79□□□□□ -1.8
CCNT1-203ENST00000550457 PSD3Q9NYI0 1048 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 TESQ9UGI8 421 aaKnown RBP3.79□□□□□ -1.8
CCNT1-203ENST00000550457 TNNQ9UQP3 1299 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 FRMD4BQ9Y2L6 1034 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 RRP7AQ9Y3A4 280 aaKnown RBP3.79□□□□□ -1.8
CCNT1-203ENST00000550457 MYO3AQ8NEV4 1616 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 SETBP1Q9Y6X0 1596 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 NRXN1Q9ULB1 1477 aa3.79□□□□□ -1.8
CCNT1-203ENST00000550457 SPHKAPQ2M3C7 1700 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 PNPLA6Q8IY17 1366 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 SPAG9O60271 1321 aaKnown RBP3.78□□□□□ -1.8
CCNT1-203ENST00000550457 EVC2Q86UK5 1308 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 SAMD9LQ8IVG5 1584 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 DRGXA6NNA5 263 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 MGST3O14880 152 aa3.78□□□□□ -1.8
CCNT1-203ENST00000550457 SLU7O95391 586 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms