RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 GUCY2FP51841 1108 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 EPHA5P54756 1037 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 DMWDQ09019 674 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 NOLC1Q14978 699 aaKnown RBP eCLIP17.97■□□□□ 0.47
SSH1-208ENST00000548522 IQCEQ6IPM2 695 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 TMC8Q8IU68 726 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 ELMOD1Q8N336 334 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 DNAJC25Q9H1X3 360 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 LMAN1LQ9HAT1 526 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 ASAH2Q9NR71 780 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 RBM12Q9NTZ6 932 aaKnown RBP17.97■□□□□ 0.47
SSH1-208ENST00000548522 NOL7Q9UMY1 257 aaKnown RBP17.97■□□□□ 0.47
SSH1-208ENST00000548522 PCDHB8Q9UN66 801 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 KMT2BQ9UMN6 2715 aaPredicted RBP17.97■□□□□ 0.47
SSH1-208ENST00000548522 CHD8Q9HCK8 2581 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 DCDC2BA2VCK2 349 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 HEPACAM2A8MVW5 462 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 TOM1L1O75674 476 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 CHRNB1P11230 501 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 CCNE1P24864 410 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 LMNB2Q03252 620 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 SRSF5Q13243 272 aaKnown RBP17.96■□□□□ 0.47
SSH1-208ENST00000548522 PDIA5Q14554 519 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 ZRSR1Q15695 479 aaKnown RBP17.96■□□□□ 0.47
SSH1-208ENST00000548522 TTC9BQ8N6N2 239 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 TMEM161BQ8NDZ6 487 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 APPL2Q8NEU8 664 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 BEST2Q8NFU1 509 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 ZNF512Q96ME7 567 aaPredicted RBP17.96■□□□□ 0.47
SSH1-208ENST00000548522 LLPHQ9BRT6 129 aaKnown RBP17.96■□□□□ 0.47
SSH1-208ENST00000548522 LRRC3Q9BY71 257 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 SLITRK6Q9H5Y7 841 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 UPF2Q9HAU5 1272 aaKnown RBP17.96■□□□□ 0.47
SSH1-208ENST00000548522 TRPV4Q9HBA0 871 aa17.96■□□□□ 0.47
SSH1-208ENST00000548522 CDV3Q9UKY7 258 aaKnown RBP17.96■□□□□ 0.47
SSH1-208ENST00000548522 A0A1W2PRU2 124 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 SLC38A8A6NNN8 435 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 PPEF2O14830 753 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 ZNF263O14978 683 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 MAPTP10636 758 aaKnown RBP17.95■□□□□ 0.46
SSH1-208ENST00000548522 TNFSF9P41273 254 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 CDR1P51861 262 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
SSH1-208ENST00000548522 SPEM2Q0P670 501 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 KRT79Q5XKE5 535 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 Q6ZS52 159 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 DEPDC1BQ8WUY9 529 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 SECISBP2LQ93073 1101 aaKnown RBP17.95■□□□□ 0.46
SSH1-208ENST00000548522 BORCS6Q96GS4 357 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 LRRC3BQ96PB8 259 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 PLIN2Q99541 437 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 FAM126AQ9BYI3 521 aaPredicted RBP17.95■□□□□ 0.46
SSH1-208ENST00000548522 TRPV5Q9NQA5 729 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 C2orf42Q9NWW7 574 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 GMEB2Q9UKD1 530 aa17.95■□□□□ 0.46
SSH1-208ENST00000548522 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.95■□□□□ 0.46
SSH1-208ENST00000548522 NPHP3-ACAD11A0A0J9YXS1 232 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 M0QZQ0 153 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 SOAT2O75908 522 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 PLS3P13797 630 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 GUCY2CP25092 1073 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 U2AF2P26368 475 aaKnown RBP eCLIP17.94■□□□□ 0.46
SSH1-208ENST00000548522 YWHAHQ04917 246 aaPredicted RBP17.94■□□□□ 0.46
SSH1-208ENST00000548522 MCL1Q07820 350 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 STRN3Q13033 797 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 DUSP4Q13115 394 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 TXNDC11Q6PKC3 985 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 PRR23BQ6ZRT6 265 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 MFSD6LQ8IWD5 586 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 GPR161Q8N6U8 529 aaKnown RBP17.94■□□□□ 0.46
SSH1-208ENST00000548522 FAM184AQ8NB25 1140 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 TTC8Q8TAM2 541 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 SPIRE2Q8WWL2 714 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 PNMA5Q96PV4 448 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 MKNK1Q9BUB5 465 aa17.94■□□□□ 0.46
SSH1-208ENST00000548522 DAXXQ9UER7 740 aaPredicted RBP17.94■□□□□ 0.46
SSH1-208ENST00000548522 PDCD11Q14690 1871 aaKnown RBP17.93■□□□□ 0.46
SSH1-208ENST00000548522 TTC26A0AVF1 554 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 CHURC1-FNTBB4DL54 471 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 KRT37O76014 449 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 OAZ2O95190 189 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 FNTBP49356 437 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 AARSP49588 968 aaKnown RBP eCLIP17.93■□□□□ 0.46
SSH1-208ENST00000548522 CCR3P51677 355 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 HMGN5P82970 282 aaKnown RBP17.93■□□□□ 0.46
SSH1-208ENST00000548522 LEMD2Q8NC56 503 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 KIF12Q96FN5 646 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 ZFYVE19Q96K21 471 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 TMEM209Q96SK2 561 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 NTPCRQ9BSD7 190 aaKnown RBP17.93■□□□□ 0.46
SSH1-208ENST00000548522 RAB34Q9BZG1 259 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 C17orf75Q9HAS0 396 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 SLC27A5Q9Y2P5 690 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 CITO14578 2027 aa17.93■□□□□ 0.46
SSH1-208ENST00000548522 PRR5-ARHGAP8B1AHC4 643 aa17.92■□□□□ 0.46
SSH1-208ENST00000548522 CLDN3O15551 220 aa17.92■□□□□ 0.46
SSH1-208ENST00000548522 MARCKSP29966 332 aaPredicted RBP17.92■□□□□ 0.46
SSH1-208ENST00000548522 LRPAP1P30533 357 aa17.92■□□□□ 0.46
SSH1-208ENST00000548522 ARHGAP8P85298 464 aa17.92■□□□□ 0.46
SSH1-208ENST00000548522 ZBTB6Q15916 424 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms