RNA–Protein interactions for RNA: ENST00000548355.5

TMEM106C-208, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-208ENST00000548355 ARRDC4Q8NCT1 418 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 SLC35G2Q8TBE7 412 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 CAGE1Q8TC20 777 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 UBXN4Q92575 508 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 GOLGA1Q92805 767 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 ZNF653Q96CK0 615 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 ARHGEF26Q96DR7 871 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 TRIM11Q96F44 468 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 TSEN34Q9BSV6 310 aaKnown RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 BEGAINQ9BUH8 593 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 SENP6Q9GZR1 1112 aaPredicted RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 VRTNQ9H8Y1 702 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 CYP3A43Q9HB55 503 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 CHST12Q9NRB3 414 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 CTTNBP2NLQ9P2B4 639 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 UBQLN1Q9UMX0 589 aaKnown RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 POLIQ9UNA4 740 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 ST3GAL5Q9UNP4 418 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 HES2Q9Y543 173 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 TRIM17Q9Y577 477 aa8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 V9GYY5 206 aaPredicted RBP8.35□□□□□ -1.07
TMEM106C-208ENST00000548355 SCN10AQ9Y5Y9 1956 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CTAGE15A4D2H0 777 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 MED7O43513 233 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CD4P01730 458 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CHRNA1P02708 482 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CTAGE8P0CG41 777 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 MYBL1P10243 752 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 UNGP13051 313 aaPredicted RBP8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 ATF7P17544 494 aaPredicted RBP8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 NSFP46459 744 aaKnown RBP8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 RAP1GAPP47736 663 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 GUCY2FP51841 1108 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 TUBB4BP68371 445 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 MGAT3Q09327 533 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 TCEAL1Q15170 157 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 RPS6KA1Q15418 735 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 ZNF394Q53GI3 561 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 NAA35Q5VZE5 725 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 LHX8Q68G74 356 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 ALKAL1Q6UXT8 129 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 PEX26Q7Z412 305 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 DAAM2Q86T65 1068 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CTAGE6Q86UF2 777 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CTAGE4Q8IX94 777 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 TTC39CQ8N584 583 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 LRRC57Q8N9N7 239 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 LRRN4CLQ8ND94 238 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CXorf38Q8TB03 319 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 TSC1Q92574 1164 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 WNT8BQ93098 351 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CAPZA3Q96KX2 299 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 ZMAT2Q96NC0 199 aaKnown RBP8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 OSBPL9Q96SU4 736 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 TLR10Q9BXR5 811 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 BCO2Q9BYV7 579 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 OSGEPQ9NPF4 335 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 CNOT8Q9UFF9 292 aaKnown RBP8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 GTF3C4Q9UKN8 822 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 IPPQ9Y573 584 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 PTCH2Q9Y6C5 1203 aa8.34□□□□□ -1.07
TMEM106C-208ENST00000548355 A0A0U1RQG5 324 aaPredicted RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 SMIM28A0A1B0GU29 152 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 KBTBD13C9JR72 458 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 BUB1BO60566 1050 aaPredicted RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 CAND2O75155 1236 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 KIF4AO95239 1232 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 LSM8O95777 96 aaKnown RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 CYP1A1P04798 512 aaPredicted RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 CYP1A2P05177 515 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 PAEPP09466 180 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 ITGA4P13612 1032 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 KCNE1P15382 129 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 ANK1P16157 1881 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 ZSCAN20P17040 1043 aaPredicted RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 BRD2P25440 801 aaKnown RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 PAFAH1B1P43034 410 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 HADHBP55084 474 aaKnown RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 CDH8P55286 799 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 CENPCQ03188 943 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 PAK2Q13177 524 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 NAA30Q147X3 362 aaPredicted RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 ELF2Q15723 593 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 ZBTB6Q15916 424 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 ERCC6LQ2NKX8 1250 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 XKR4Q5GH76 650 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 GLRA4Q5JXX5 417 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 TEX35Q5T0J7 233 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 CCDC181Q5TID7 509 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 LIN9Q5TKA1 542 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 SLFN11Q7Z7L1 901 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 PASD1Q8IV76 773 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 MCOLN2Q8IZK6 566 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 TMEM130Q8N3G9 435 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 LRRC52Q8N7C0 313 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 SMG8Q8ND04 991 aaKnown RBP8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 ZNF606Q8WXB4 792 aa8.33□□□□□ -1.08
TMEM106C-208ENST00000548355 CPA5Q8WXQ8 436 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms