RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.09□□□□□ -1.274e-7■■■□□ 16.7
CPSF7-222ENST00000544585 KATNBL1Q9H079 304 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 ARMT1Q9H993 441 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 MKNK2Q9HBH9 465 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 RAVER2Q9HCJ3 691 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 SYNPO2Q9UMS6 1093 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 NOC2LQ9Y3T9 749 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 SPO11Q9Y5K1 396 aa7.09□□□□□ -1.27
CPSF7-222ENST00000544585 PRRC2BQ5JSZ5 2229 aaKnown RBP7.09□□□□□ -1.27
CPSF7-222ENST00000544585 CDK5RAP2Q96SN8 1893 aa7.09□□□□□ -1.28
CPSF7-222ENST00000544585 GRIN2DO15399 1336 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-222ENST00000544585 C7orf72A4D263 438 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 KLHL33A6NCF5 533 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 GOLGA8AA7E2F4 631 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 GOLGA8BA8MQT2 603 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 GOLIM4O00461 696 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 TGM5O43548 720 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 PRKAB2O43741 272 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 CREB3O43889 395 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 NPHS1O60500 1241 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 IL33O95760 270 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 LTFP02788 710 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ADMP35318 185 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 TAP1Q03518 808 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 UBE3CQ15386 1083 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 CLUL1Q15846 466 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 LONRF3Q496Y0 759 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 SBK1Q52WX2 424 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 CREB3L3Q68CJ9 461 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ZSCAN25Q6NSZ9 544 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 CTR9Q6PD62 1173 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 TLK2Q86UE8 772 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 OSTM1Q86WC4 334 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 RASSF3Q86WH2 238 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ZNF444Q8N0Y2 327 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-222ENST00000544585 FAM133AQ8N9E0 248 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 CHURC1Q8WUH1 139 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ARNTL2Q8WYA1 636 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 TMEM169Q96HH4 297 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 WNT8AQ9H1J5 351 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ALDH8A1Q9H2A2 487 aaPredicted RBP7.08□□□□□ -1.28
CPSF7-222ENST00000544585 PCIF1Q9H4Z3 704 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ACAD9Q9H845 621 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 CERS4Q9HA82 394 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ZNF287Q9HBT7 754 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 TOMM22Q9NS69 142 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 ZSWIM5Q9P217 1185 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 CLIP2Q9UDT6 1046 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 FOCADQ5VW36 1801 aa7.08□□□□□ -1.28
CPSF7-222ENST00000544585 MUC3AQ02505 3323 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-222ENST00000544585 HIP1RO75146 1068 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 WFS1O76024 890 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 MBD4O95243 580 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 NDUFB10O96000 172 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 IFIT2P09913 472 aaKnown RBP7.07□□□□□ -1.28
CPSF7-222ENST00000544585 IQCF3P0C7M6 154 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 GNAT1P11488 350 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 SLC9A1P19634 815 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 ADD2P35612 726 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 RBM10P98175 930 aaKnown RBP7.07□□□□□ -1.28
CPSF7-222ENST00000544585 IRF9Q00978 393 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 CNTN2Q02246 1040 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 SPIRE1Q08AE8 756 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 BFSP2Q13515 415 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 LRRC32Q14392 662 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 TERF2Q15554 542 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 GPR19Q15760 415 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 ARHGAP29Q52LW3 1261 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 DEFB128Q7Z7B8 93 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 HERC6Q8IVU3 1022 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 KIAA1958Q8N8K9 716 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 GATA6Q92908 595 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 SLC39A13Q96H72 371 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 LRGUKQ96M69 825 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 NUP88Q99567 741 aaPredicted RBP7.07□□□□□ -1.28
CPSF7-222ENST00000544585 JAM3Q9BX67 310 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 FTOQ9C0B1 505 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPSF7-222ENST00000544585 DUSP13Q9UII6 198 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 FBXL7Q9UJT9 491 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 INVSQ9Y283 1065 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 SLC4A4Q9Y6R1 1079 aa7.07□□□□□ -1.28
CPSF7-222ENST00000544585 ASTN1O14525 1302 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CNTNAP5Q8WYK1 1306 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CDH23Q9H251 3354 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CYP2D7A0A087X1C5 515 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 H7BY64 318 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 ZNF561-AS1K7EIQ3 104 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 PLA2G6O60733 806 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CYP2C9P11712 490 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 MRE11P49959 708 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 CPT1AP50416 773 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 JAM2P57087 298 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 PSMC6P62333 389 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 PHC1P78364 1004 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 ODF1Q14990 250 aa7.06□□□□□ -1.28
CPSF7-222ENST00000544585 ACAP2Q15057 778 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms