RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 NOC2LQ9Y3T9 749 aaKnown RBP21.2■□□□□ 0.98
COPS7A-218ENST00000543939 HES2Q9Y543 173 aa21.2■□□□□ 0.98
COPS7A-218ENST00000543939 BUB1BO60566 1050 aaPredicted RBP21.19■□□□□ 0.98
COPS7A-218ENST00000543939 STAU1O95793 577 aaKnown RBP21.19■□□□□ 0.98
COPS7A-218ENST00000543939 MYCNP04198 464 aaPredicted RBP21.19■□□□□ 0.98
COPS7A-218ENST00000543939 CYP1A2P05177 515 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 RPLP2P05387 115 aaKnown RBP21.19■□□□□ 0.98
COPS7A-218ENST00000543939 POLR2BP30876 1174 aaKnown RBP21.19■□□□□ 0.98
COPS7A-218ENST00000543939 RBP5P82980 135 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 ZBTB6Q15916 424 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 WDR72Q3MJ13 1102 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 TEX35Q5T0J7 233 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 ZMAT2Q96NC0 199 aaKnown RBP21.19■□□□□ 0.98
COPS7A-218ENST00000543939 ABCB6Q9NP58 842 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 GTF3C4Q9UKN8 822 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 AGAP1Q9UPQ3 857 aa21.19■□□□□ 0.98
COPS7A-218ENST00000543939 PDE2AO00408 941 aaPredicted RBP21.18■□□□□ 0.98
COPS7A-218ENST00000543939 FKTNO75072 461 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 RECQL4O94761 1208 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 MTA2O94776 668 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 TUBB4BP68371 445 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 DAAM2Q86T65 1068 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 RABGGTAQ92696 567 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 PSMB7Q99436 277 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 CNTN3Q9P232 1028 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 PACSIN2Q9UNF0 486 aaPredicted RBP21.18■□□□□ 0.98
COPS7A-218ENST00000543939 FRMPD3Q5JV73 1810 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 THAP12O43422 761 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 KIF4AO95239 1232 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 CFHP08603 1231 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 CXCR5P32302 372 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 CENPCQ03188 943 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 MGAT3Q09327 533 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 RPS6KA1Q15418 735 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 RNF180Q86T96 592 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 NT5DC3Q86UY8 548 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 ZNF606Q8WXB4 792 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 CYFIP2Q96F07 1278 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 HPDLQ96IR7 371 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 SENP6Q9GZR1 1112 aaPredicted RBP21.18■□□□□ 0.98
COPS7A-218ENST00000543939 SDCBP2Q9H190 292 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 CTTNBP2NLQ9P2B4 639 aa21.18■□□□□ 0.98
COPS7A-218ENST00000543939 SCN1AP35498 2009 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 CHRNA1P02708 482 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 HTRA3P83110 453 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 ZNF572Q7Z3I7 529 aaPredicted RBP21.17■□□□□ 0.98
COPS7A-218ENST00000543939 PEX26Q7Z412 305 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 ZNF653Q96CK0 615 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 RPGRIP1Q96KN7 1286 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 PDCL3Q9H2J4 239 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 CYP3A43Q9HB55 503 aa21.17■□□□□ 0.98
COPS7A-218ENST00000543939 CABYRO75952 493 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 AKAP5P24588 427 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 RAP1GAPP47736 663 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 NOMO3P69849 1222 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 XKR4Q5GH76 650 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 NAA35Q5VZE5 725 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 MCOLN2Q8IZK6 566 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 SMG8Q8ND04 991 aaKnown RBP21.16■□□□□ 0.98
COPS7A-218ENST00000543939 CAGE1Q8TC20 777 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 ZNF296Q8WUU4 475 aaPredicted RBP21.16■□□□□ 0.98
COPS7A-218ENST00000543939 CPA5Q8WXQ8 436 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 SMYD3Q9H7B4 428 aa21.16■□□□□ 0.98
COPS7A-218ENST00000543939 ATMINO43313 823 aaPredicted RBP21.15■□□□□ 0.98
COPS7A-218ENST00000543939 INHAP05111 366 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 P4HA1P13674 534 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 YY1P25490 414 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 ACLYP53396 1101 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 CDH8P55286 799 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 ARHGEF6Q15052 776 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 PTGISQ16647 500 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 ZNF394Q53GI3 561 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 GPR161Q8N6U8 529 aaKnown RBP21.15■□□□□ 0.98
COPS7A-218ENST00000543939 SLAIN1Q8ND83 568 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 TSPAN18Q96SJ8 248 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 ZSWIM1Q9BR11 485 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 APOL6Q9BWW8 343 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 RNF39Q9H2S5 420 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 UVRAGQ9P2Y5 699 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 RNF14Q9UBS8 474 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 AMFRQ9UKV5 643 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 IPPQ9Y573 584 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 CES2O00748 559 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 RPS6KA5O75582 802 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 CTSHP09668 335 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 ZSCAN20P17040 1043 aaPredicted RBP21.15■□□□□ 0.98
COPS7A-218ENST00000543939 NSFP46459 744 aaKnown RBP21.15■□□□□ 0.98
COPS7A-218ENST00000543939 PRMT2P55345 433 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 ITGA7Q13683 1181 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 C11orf63Q6NUN7 778 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 MON1BQ7L1V2 547 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 PASD1Q8IV76 773 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 NOA1Q8NC60 698 aaKnown RBP21.15■□□□□ 0.98
COPS7A-218ENST00000543939 BEST2Q8NFU1 509 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 TRIM11Q96F44 468 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 HES6Q96HZ4 224 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 NUP85Q9BW27 656 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 AVENQ9NQS1 362 aaPredicted RBP21.15■□□□□ 0.98
COPS7A-218ENST00000543939 SAGE1Q9NXZ1 904 aa21.15■□□□□ 0.98
COPS7A-218ENST00000543939 CNOT8Q9UFF9 292 aaKnown RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms