RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 SLC25A13Q9UJS0 675 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 PCDHA10Q9Y5I2 948 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 PALLDQ8WX93 1383 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 MYO3BQ8WXR4 1341 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 PSMD3O43242 534 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 CYP2B6P20813 491 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 RGS4P49798 205 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 TMEM117Q9H0C3 514 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 HIST2H2ACQ16777 129 aaPredicted RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 HIST2H2AA3Q6FI13 130 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 C16orf89Q6UX73 402 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 DHX40Q8IX18 779 aaKnown RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 KLF6Q99612 283 aaPredicted RBP15.32■□□□□ 0.04
LRRK1-207ENST00000531270 SH3GL3Q99963 347 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 RAPGEF6Q8TEU7 1601 aa15.32■□□□□ 0.04
LRRK1-207ENST00000531270 KYAT1Q16773 422 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 C10orf120Q5SQS8 335 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CAPRIN2Q6IMN6 1127 aaKnown RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CCDC60Q8IWA6 550 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 MICU2Q8IYU8 434 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 TRIM51Q9BSJ1 452 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 THTPAQ9BU02 230 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 MRPS26Q9BYN8 205 aaKnown RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CRLS1Q9UJA2 301 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 SATB2Q9UPW6 733 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CHMP2BQ9UQN3 213 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 AVPR1AP37288 418 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 MTFR1Q15390 333 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 ENOSF1Q7L5Y1 443 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 RCOR2Q8IZ40 523 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 RNPEPQ9H4A4 650 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CD209Q9NNX6 404 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 ABCC10Q5T3U5 1492 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 RTN2O75298 545 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 AP3M2P53677 418 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 RFFLQ8WZ73 363 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 L3MBTL3Q96JM7 780 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 ARHGEF3Q9NR81 526 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 PVALEFA0A1B0GWK0 134 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 ZBTB39O15060 712 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CHI3L1P36222 383 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 PRIM2P49643 509 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 RBP5P82980 135 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 UBA3Q8TBC4 463 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 MED15Q96RN5 788 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 PTPRKQ15262 1439 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 NCF1BA6NI72 391 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 LRRIQ3A6PVS8 624 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 NCF1CA8MVU1 366 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CFAP99D6REC4 459 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 TSC22D2O75157 780 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 RPS6KA5O75582 802 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 KRT75O95678 551 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 CAPN1P07384 714 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 ITGA4P13612 1032 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 NCF1P14598 390 aaPredicted RBP15.31■□□□□ 0.04
LRRK1-207ENST00000531270 ATL2Q8NHH9 583 aa15.31■□□□□ 0.04
LRRK1-207ENST00000531270 TEX33O43247 280 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 POU4F1Q01851 419 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 TRIM32Q13049 653 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 STAT4Q14765 748 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 RGS5O15539 181 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 ALDH1A3P47895 512 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 ZNF157P51786 506 aaPredicted RBP15.3■□□□□ 0.04
LRRK1-207ENST00000531270 DEFA1P59665 94 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 DEFA3P59666 94 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 LDHDQ86WU2 507 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 HPS3Q969F9 1004 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 WWOXQ9NZC7 414 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 BLOC1S6Q9UL45 172 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 INSRP06213 1382 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 EVPLLA8MZ36 301 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 H2AFYO75367 372 aaKnown RBP15.3■□□□□ 0.04
LRRK1-207ENST00000531270 HARS2P49590 506 aaKnown RBP15.3■□□□□ 0.04
LRRK1-207ENST00000531270 PCYOX1LQ8NBM8 494 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 NMRK2Q9NPI5 230 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 FHOD1Q9Y613 1164 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 GRK2P25098 689 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 EFNA5P52803 228 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 SGF29Q96ES7 293 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 GID8Q9NWU2 228 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 PCDHB7Q9Y5E2 793 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 TTC26A0AVF1 554 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 ANO9A1A5B4 782 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 ZNF185O15231 689 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 HNRNPRO43390 633 aaKnown RBP15.3■□□□□ 0.04
LRRK1-207ENST00000531270 GGPS1O95749 300 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 MPP6Q9NZW5 540 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 RPS6KB2Q9UBS0 482 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 LIMA1Q9UHB6 759 aaKnown RBP15.3■□□□□ 0.04
LRRK1-207ENST00000531270 MINPP1Q9UNW1 487 aa15.3■□□□□ 0.04
LRRK1-207ENST00000531270 ITSN2Q9NZM3 1697 aa15.29■□□□□ 0.04
LRRK1-207ENST00000531270 DLGAP3O95886 979 aa15.29■□□□□ 0.04
LRRK1-207ENST00000531270 GRM4Q14833 912 aa15.29■□□□□ 0.04
LRRK1-207ENST00000531270 SMTNL2Q2TAL5 461 aa15.29■□□□□ 0.04
LRRK1-207ENST00000531270 DCAF6Q58WW2 860 aa15.29■□□□□ 0.04
LRRK1-207ENST00000531270 PPP1R18Q6NYC8 613 aa15.29■□□□□ 0.04
LRRK1-207ENST00000531270 CCDC103Q8IW40 242 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms