RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 RSAD1Q9HA92 442 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 RNF216Q9NWF9 866 aaPredicted RBP15.47■□□□□ 0.07
TTC39A-216ENST00000530004 CXXC1Q9P0U4 656 aaPredicted RBP15.47■□□□□ 0.07
TTC39A-216ENST00000530004 TRIM10Q9UDY6 481 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 ADAMTS1Q9UHI8 967 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 GIT1Q9Y2X7 761 aa15.47■□□□□ 0.07
TTC39A-216ENST00000530004 A0A087X0T9 212 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 RCCD1A6NED2 376 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 LACTBL1A8MY62 500 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 TMEM191BP0C7N4 346 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 FAM228BP0C875 321 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 MAGEA1P43355 309 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 GCNT1Q02742 428 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 CCDC122Q5T0U0 273 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 SPOPLQ6IQ16 392 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 ZNF662Q6ZS27 426 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 SHC3Q92529 594 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 ANKRD36BP1Q96IX9 119 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 SNX27Q96L92 541 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 IRX2Q9BZI1 471 aaPredicted RBP15.46■□□□□ 0.07
TTC39A-216ENST00000530004 PLEKHA5Q9HAU0 1116 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 UBN1Q9NPG3 1134 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
TTC39A-216ENST00000530004 KIF5CO60282 957 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 CLSTN1O94985 981 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 TNNC2P02585 160 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 FGFR1P11362 822 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 ANXA13P27216 316 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 USP8P40818 1118 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 MLLT1Q03111 559 aaPredicted RBP15.45■□□□□ 0.06
TTC39A-216ENST00000530004 RASIP1Q5U651 963 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 ALKAL1Q6UXT8 129 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 ENOSF1Q7L5Y1 443 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 VPS36Q86VN1 386 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 KIF18AQ8NI77 898 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 FAM81BQ96LP2 452 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 ZFP42Q96MM3 310 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 GAD1Q99259 594 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 IMPG2Q9BZV3 1241 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 LACRTQ9GZZ8 138 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 CXCL16Q9H2A7 254 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 MTIF3Q9H2K0 278 aaKnown RBP15.45■□□□□ 0.06
TTC39A-216ENST00000530004 RNF19AQ9NV58 838 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 KLK14Q9P0G3 267 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 DNAI1Q9UI46 699 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 R3HCC1Q9Y3T6 440 aaKnown RBP15.45■□□□□ 0.06
TTC39A-216ENST00000530004 MICAL3Q7RTP6 2002 aa15.45■□□□□ 0.06
TTC39A-216ENST00000530004 UPP2O95045 317 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 CST3P01034 146 aaPredicted RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 NFICP08651 508 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 MLH1P40692 756 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 NOP14P78316 857 aaKnown RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 KIF5AQ12840 1032 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 XKR4Q5GH76 650 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 CLLU1OSQ5K130 101 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 C9orf50Q5SZB4 431 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 SCARA3Q6AZY7 606 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 JADE1Q6IE81 842 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 CD302Q8IX05 232 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 FAM71AQ8IYT1 594 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 GSTCDQ8NEC7 633 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 ASB7Q9H672 318 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 APOBEC3GQ9HC16 384 aaKnown RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 CNTN3Q9P232 1028 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 GUCA1BQ9UMX6 200 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 TTC3P53804 2025 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 ARL5CA6NH57 179 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 INPPL1O15357 1258 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 HOXA2O43364 376 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 KRT86O43790 486 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 AFF1P51825 1210 aaKnown RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 TRPC3Q13507 836 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 BMS1Q14692 1282 aaKnown RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 SHHQ15465 462 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 GLB1LQ6UWU2 654 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 TMCO2Q7Z6W1 182 aaPredicted RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 ARID3AQ99856 593 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 TSGA10Q9BZW7 698 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 UBE2OQ9C0C9 1292 aaKnown RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 LUC7LQ9NQ29 371 aaKnown RBP15.44■□□□□ 0.06
TTC39A-216ENST00000530004 NUB1Q9Y5A7 615 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 PAXBP1Q9Y5B6 917 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 SLC4A7Q9Y6M7 1214 aa15.44■□□□□ 0.06
TTC39A-216ENST00000530004 PTGESO14684 152 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 CYP26A1O43174 497 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 DGKIO75912 1065 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 ASS1P00966 412 aaKnown RBP15.43■□□□□ 0.06
TTC39A-216ENST00000530004 CUL2Q13617 745 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 TXLNBQ8N3L3 684 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 LNX1Q8TBB1 728 aaPredicted RBP15.43■□□□□ 0.06
TTC39A-216ENST00000530004 PHOSPHO2Q8TCD6 241 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 ZMAT2Q96NC0 199 aaKnown RBP15.43■□□□□ 0.06
TTC39A-216ENST00000530004 WDR24Q96S15 920 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 RPS6KC1Q96S38 1066 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 SLC9A7Q96T83 725 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 SYT11Q9BT88 431 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 NAGPAQ9UK23 515 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 ANK1P16157 1881 aa15.43■□□□□ 0.06
TTC39A-216ENST00000530004 SMIM28A0A1B0GU29 152 aa15.42■□□□□ 0.06
TTC39A-216ENST00000530004 DDX3XO00571 662 aaKnown RBP eCLIP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms