RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 NT5DC1Q5TFE4 455 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 ARID3BQ8IVW6 561 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 CAMKK1Q8N5S9 505 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 TNFRSF25Q93038 417 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 CHFRQ96EP1 664 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 ZNF274Q96GC6 653 aaPredicted RBP17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 ZMAT2Q96NC0 199 aaKnown RBP17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 PTPRHQ9HD43 1115 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 GTSE1Q9NYZ3 720 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 PCDHA12Q9UN75 941 aa17.84■□□□□ 0.45
CHMP4A-203ENST00000527154 PODXLO00592 558 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 BAG4O95429 457 aaKnown RBP17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 MYL4P12829 197 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 KCNE1P15382 129 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 GRM5P41594 1212 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 ZNF252P-AS1Q0IIN9 211 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 TMEM196Q5HYL7 178 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 TCEAL6Q6IPX3 200 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 PIK3AP1Q6ZUJ8 805 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 YAF2Q8IY57 180 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 TCEAL3Q969E4 200 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 SLC38A7Q9NVC3 462 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 TNFSF13BQ9Y275 285 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 YIPF1Q9Y548 306 aa17.83■□□□□ 0.44
CHMP4A-203ENST00000527154 BCLAF3A2AJT9 711 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 TAF4O00268 1085 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 CEACAM1P13688 526 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 RPL9P32969 192 aaKnown RBP17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 PLCB2Q00722 1185 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 RING1Q06587 406 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 CTXN3Q4LDR2 81 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 STXBP5Q5T5C0 1151 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 ZNF280DQ6N043 979 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 GAREM2Q75VX8 874 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 MTMR9Q96QG7 549 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 EDEM2Q9BV94 578 aa17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 TTC12Q9H892 705 aaPredicted RBP17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 NUP210Q8TEM1 1887 aaPredicted RBP17.82■□□□□ 0.44
CHMP4A-203ENST00000527154 A0A1W2PRU2 124 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 LNP1A1A4G5 178 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 FAM205CA6NFA0 338 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 MEFVO15553 781 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 TOP3BO95985 862 aaKnown RBP17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 CYP11B2P19099 503 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 PXNP49023 591 aaPredicted RBP17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 ARPP19P56211 112 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 ATF7IP2Q5U623 682 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 RNF19BQ6ZMZ0 732 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 CEP120Q8N960 986 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 ZFYVE19Q96K21 471 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 TMEM209Q96SK2 561 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 CRISPLD1Q9H336 500 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 CNTN3Q9P232 1028 aa17.81■□□□□ 0.44
CHMP4A-203ENST00000527154 ITPR1Q14643 2758 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 STK36Q9NRP7 1315 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 A0A087WWV3 80 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 C4orf47A7E2U8 309 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 ABLIM1O14639 778 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 TRDMT1O14717 391 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 CPLX1O14810 134 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 MARCH6O60337 910 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 OAZ2O95190 189 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 CAPNS1P04632 268 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 CCDC192P0DO97 292 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 ATP2B1P20020 1258 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 SPINK2P20155 84 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 PSMA5P28066 241 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 EFNA5P52803 228 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 FOXC1Q12948 553 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 SH3PXD2AQ5TCZ1 1133 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 FSTL4Q6MZW2 842 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 MAEAQ7L5Y9 396 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 CATSPER3Q86XQ3 398 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 DDX12PQ92771 950 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 CCDC43Q96MW1 224 aaKnown RBP17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 SCNM1Q9BWG6 230 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 OXCT2Q9BYC2 517 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 SLITRK6Q9H5Y7 841 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 ZSWIM6Q9HCJ5 1215 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 TUFT1Q9NNX1 390 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 TOPORSQ9NS56 1045 aaPredicted RBP17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 GJB4Q9NTQ9 266 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
CHMP4A-203ENST00000527154 M0QZQ0 153 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 CDX4O14627 284 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 ATG13O75143 517 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 PRAMEF12O95522 483 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 TNK2Q07912 1038 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 PLD1Q13393 1074 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 DAB2IPQ5VWQ8 1189 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 RUFY3Q7L099 469 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 APPL2Q8NEU8 664 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 DEPTORQ8TB45 409 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 BPIFB1Q8TDL5 484 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 FAM83CQ9BQN1 747 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 CDT1Q9H211 546 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 EBF1Q9UH73 591 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 NEUROG3Q9Y4Z2 214 aa17.79■□□□□ 0.44
CHMP4A-203ENST00000527154 WNT7AO00755 349 aa17.78■□□□□ 0.44
CHMP4A-203ENST00000527154 CDC45O75419 566 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms