RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PRCPP42785 496 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 CLDN10P78369 228 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 RBP5P82980 135 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 YWHAHQ04917 246 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-225ENST00000523950 LRRC63Q05C16 580 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 ITIH3Q06033 890 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 RAB33AQ14088 237 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-225ENST00000523950 SLC8B1Q6J4K2 584 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 ZNF280DQ6N043 979 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 FOXR2Q6PJQ5 311 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 PRSS55Q6UWB4 352 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-225ENST00000523950 CYP26C1Q6V0L0 522 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 RTL10Q7L3V2 364 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 SMYD4Q8IYR2 804 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-225ENST00000523950 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 DHTKD1Q96HY7 919 aaPredicted RBP13.55□□□□□ -0.24
VEGFA-225ENST00000523950 CLSTN3Q9BQT9 956 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 MKNK1Q9BUB5 465 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 MTMR12Q9C0I1 747 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 SFXN1Q9H9B4 322 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 LMBRD1Q9NUN5 540 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 BRWD1Q9NSI6 2320 aa13.55□□□□□ -0.24
VEGFA-225ENST00000523950 PPEF2O14830 753 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 TBC1D4O60343 1298 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 OAZ2O95190 189 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 PAPLNO95428 1278 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 CYP11A1P05108 521 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 DLATP10515 647 aaKnown RBP13.54□□□□□ -0.24
VEGFA-225ENST00000523950 BMP1P13497 986 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 EPCAMP16422 314 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 POLR2BP30876 1174 aaKnown RBP13.54□□□□□ -0.24
VEGFA-225ENST00000523950 MORC3Q14149 939 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 CES5AQ6NT32 575 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 LILRA6Q6PI73 481 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 SYCE2Q6PIF2 218 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 INTS8Q75QN2 995 aaKnown RBP13.54□□□□□ -0.24
VEGFA-225ENST00000523950 CMASQ8NFW8 434 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-225ENST00000523950 CXorf38Q8TB03 319 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 TMC2Q8TDI7 906 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 PARD3BQ8TEW8 1205 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 ERCC4Q92889 916 aaPredicted RBP13.54□□□□□ -0.24
VEGFA-225ENST00000523950 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 RHOBTB2Q9BYZ6 727 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 CLSTN2Q9H4D0 955 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 KIAA1468Q9P260 1216 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 PRKAG3Q9UGI9 489 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 MAFFQ9ULX9 164 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 AGAP1Q9UPQ3 857 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 REV3LO60673 3130 aa13.54□□□□□ -0.24
VEGFA-225ENST00000523950 OR6C75A6NL08 312 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 KPNA7A9QM74 516 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 CETN3O15182 167 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 TGM5O43548 720 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 CCNE1P24864 410 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 OR1D2P34982 312 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 PSMC2P35998 433 aaKnown RBP13.53□□□□□ -0.24
VEGFA-225ENST00000523950 KCNQ1P51787 676 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
VEGFA-225ENST00000523950 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
VEGFA-225ENST00000523950 MYO1EQ12965 1108 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 ADAM9Q13443 819 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 SMAD2Q15796 467 aaKnown RBP13.53□□□□□ -0.24
VEGFA-225ENST00000523950 CTXN3Q4LDR2 81 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 C15orf39Q6ZRI6 1047 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 TRAPPC11Q7Z392 1133 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 ZC3H3Q8IXZ2 948 aaKnown RBP13.53□□□□□ -0.24
VEGFA-225ENST00000523950 CSGALNACT2Q8N6G5 542 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 OR5B17Q8NGF7 314 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 SUSD6Q92537 303 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 CCDC127Q96BQ5 260 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 BORCS6Q96GS4 357 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 NECTIN4Q96NY8 510 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 S1PR5Q9H228 398 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 ADAM7Q9H2U9 754 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 MAN1C1Q9NR34 630 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 ZDHHC7Q9NXF8 308 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 GDAP2Q9NXN4 497 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 FBXL5Q9UKA1 691 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 FBXW11Q9UKB1 542 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 CDY1Q9Y6F8 540 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 PTPRJQ12913 1337 aa13.53□□□□□ -0.24
VEGFA-225ENST00000523950 BICDL2A1A5D9 508 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-225ENST00000523950 CYB561D2O14569 222 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 IKBKBO14920 756 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 SPTLC1O15269 473 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 AKAP3O75969 853 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 STAU1O95793 577 aaKnown RBP13.52□□□□□ -0.25
VEGFA-225ENST00000523950 KRT19P08727 400 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 KRT13P13646 458 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 RPL17P18621 184 aaKnown RBP13.52□□□□□ -0.25
VEGFA-225ENST00000523950 HOXA9P31269 272 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 MTHFRP42898 656 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 CASP4P49662 377 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 MCCD1P59942 119 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms