RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 POLR3CQ9BUI4 534 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 OXCT2Q9BYC2 517 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 NCANO14594 1321 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 PHLPP2Q6ZVD8 1323 aa12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 KIF26AQ9ULI4 1882 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-203ENST00000517667 K7ERI5 159 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 DPYSL4O14531 572 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 AXIN1O15169 862 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 MED24O75448 989 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 AKAP3O75969 853 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 KCNK5O95279 499 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 FGF19O95750 216 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 KCNE1P15382 129 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 GJA1P17302 382 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 MCM4P33991 863 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 RAP1GAPP47736 663 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 SOX9P48436 509 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 ZNF568Q3ZCX4 644 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 NT5DC1Q5TFE4 455 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 SKAP1Q86WV1 359 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 KIFC3Q9BVG8 833 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 LSM14BQ9BX40 385 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 OBP2AQ9NY56 170 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 CNTN3Q9P232 1028 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 ORC3Q9UBD5 711 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 YIPF1Q9Y548 306 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 ZZEF1O43149 2961 aa12.54□□□□□ -0.4
TRAPPC9-203ENST00000517667 A0A1W2PRU2 124 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 PFKFB2O60825 505 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 ATG13O75143 517 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 CCDC192P0DO97 292 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 MUTP22033 750 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 RPA1P27694 616 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 MARCKSP29966 332 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 EPHB3P54753 998 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 OSTNP61366 133 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 PON2Q15165 354 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 PTPAQ15257 358 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 WDR44Q5JSH3 913 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 TXNDC11Q6PKC3 985 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 ARID3BQ8IVW6 561 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 CEP120Q8N960 986 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 DDX12PQ92771 950 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 RSPRY1Q96DX4 576 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 CDT1Q9H211 546 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 VPS45Q9NRW7 570 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 GTSE1Q9NYZ3 720 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 TPCN1Q9ULQ1 816 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 PCDHB8Q9UN66 801 aa12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 ANKRD11Q6UB99 2663 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-203ENST00000517667 EML5Q05BV3 1969 aa12.52□□□□□ -0.4
TRAPPC9-203ENST00000517667 WDFY3Q8IZQ1 3526 aa12.52□□□□□ -0.4
TRAPPC9-203ENST00000517667 LAMA1P25391 3075 aa12.52□□□□□ -0.4
TRAPPC9-203ENST00000517667 SPEGQ15772 3267 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 MCF2P10911 925 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 ALDH1A3P47895 512 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 YWHAHQ04917 246 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 ARHGAP15Q53QZ3 475 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 HAUS3Q68CZ6 603 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 UNQ6494/PRO21346Q6UXR6 183 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 RNF19BQ6ZMZ0 732 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 TMC8Q8IU68 726 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 ZC3H10Q96K80 434 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 TBC1D32Q96NH3 1257 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 ACO2Q99798 780 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 LRRC3Q9BY71 257 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 PTPRHQ9HD43 1115 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 RXFP3Q9NSD7 469 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 C2orf42Q9NWW7 574 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 RALYQ9UKM9 306 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 ASB3Q9Y575 518 aa12.52□□□□□ -0.41
TRAPPC9-203ENST00000517667 OAZ2O95190 189 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 WEE1P30291 646 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 MPLP40238 635 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 COL9A2Q14055 689 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 CCDC6Q16204 474 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 ITPRIPL2Q3MIP1 535 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 RNF43Q68DV7 783 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 PSAPL1Q6NUJ1 521 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 ITIH5Q86UX2 942 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 KBTBD6Q86V97 674 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 CAMKK1Q8N5S9 505 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 C18orf25Q96B23 403 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 TCHPQ9BT92 498 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 TMEM134Q9H6X4 195 aa12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-203ENST00000517667 SLC8A2Q9UPR5 921 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms