RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 SMTNL2Q2TAL5 461 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 LMO3Q8TAP4 145 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 TMC2Q8TDI7 906 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 CPSF3Q9UKF6 684 aaKnown RBP10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 TNFSF13BQ9Y275 285 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 MYH9P35579 1960 aaKnown RBP10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 SSU72P8A0A1W2PR75 194 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 MARCKSL1P49006 195 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 PAK2Q13177 524 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 KCNT1Q5JUK3 1230 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 ZNF606Q8WXB4 792 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 NDRG1Q92597 394 aaKnown RBP10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 GOLGA1Q92805 767 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 HVCN1Q96D96 273 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 DPH5Q9H2P9 285 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 PADI3Q9ULW8 664 aa10.41□□□□□ -0.74
EFCAB13-203ENST00000517484 PDE2AO00408 941 aaPredicted RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 C2CD2LO14523 706 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 POLR3GO15318 223 aaPredicted RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 LCP1P13796 627 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 RTP1P59025 263 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 BMS1Q14692 1282 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 LONRF2Q1L5Z9 754 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 SYCP2LQ5T4T6 812 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 SLC27A1Q6PCB7 646 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 ERICH1Q86X53 443 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 ABI1Q8IZP0 508 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 STKLD1Q8NE28 680 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 UHMK1Q8TAS1 419 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 OSBPL9Q96SU4 736 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 PAAF1Q9BRP4 392 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 DDX47Q9H0S4 455 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 ST6GALNAC4Q9H4F1 302 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 CGNQ9P2M7 1197 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 KBTBD13C9JR72 458 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 GAS2O43903 313 aaKnown RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 NDST1P52848 882 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 ACLYP53396 1101 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 MYO1EQ12965 1108 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 CCDC70Q6NSX1 233 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 TSHZ1Q6ZSZ6 1077 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 ZNF467Q7Z7K2 595 aaPredicted RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 ZNF564Q8TBZ8 553 aaPredicted RBP10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 LRRN4Q8WUT4 740 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 TWNKQ96RR1 684 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 SNX25Q9H3E2 840 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 PCDHB2Q9Y5E7 798 aa10.4□□□□□ -0.74
EFCAB13-203ENST00000517484 GRID2IPA4D2P6 1211 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 ZSCAN5CA6NGD5 496 aaPredicted RBP10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 F8W810 466 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 ATP2C2O75185 946 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 FGGP02679 453 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 HMGCRP04035 888 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 HOXC6P09630 235 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 ITGA4P13612 1032 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 HOXA11P31270 313 aaPredicted RBP10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 GPC5P78333 572 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 MCL1Q07820 350 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 ATP13A4Q4VNC1 1196 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 CTU1Q7Z7A3 348 aaKnown RBP10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 TXLNBQ8N3L3 684 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 NETO2Q8NC67 525 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 BEST2Q8NFU1 509 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 TFAP2BQ92481 460 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 DNAJC17Q9NVM6 304 aaKnown RBP10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 JRKLQ9Y4A0 524 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 IPPQ9Y573 584 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 PSME4Q14997 1843 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 CLDN5O00501 218 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 KRIT1O00522 736 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 OR1G1P47890 313 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 FMO1Q01740 532 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 HSP90AA2PQ14568 343 aaPredicted RBP10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 HDAC7Q8WUI4 952 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 B3GALT6Q96L58 329 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 MCEEQ96PE7 176 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 NGRNQ9NPE2 291 aaKnown RBP10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 MRFAP1Q9Y605 127 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 ALG6Q9Y672 507 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 CNTNAP2Q9UHC6 1331 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 KIAA1217Q5T5P2 1943 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 IGKV6-21A0A0C4DH24 114 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 F5H423 210 aaPredicted RBP10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 FGFR1P11362 822 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 CYBAP13498 195 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 COMTP21964 271 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 CTNNA2P26232 953 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 KCNJ1P48048 391 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 RBP5P82980 135 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 FBXO38Q6PIJ6 1188 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 FAM228AQ86W67 206 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 WDR49Q8IV35 697 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 ARRDC4Q8NCT1 418 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 KRT35Q92764 455 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 PARD6BQ9BYG5 372 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 EDEM3Q9BZQ6 932 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 GPR88Q9GZN0 384 aa10.39□□□□□ -0.75
EFCAB13-203ENST00000517484 DDX20Q9UHI6 824 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms