RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 SHKBP1Q8TBC3 707 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 BSNDQ8WZ55 320 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 SUSD3Q96L08 255 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 OXCT2Q9BYC2 517 aaPredicted RBP11.16□□□□□ -0.62
DDR1-276ENST00000514534 VPS45Q9NRW7 570 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 OBP2AQ9NY56 170 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 RALYQ9UKM9 306 aaKnown RBP11.16□□□□□ -0.62
DDR1-276ENST00000514534 TPCN1Q9ULQ1 816 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 TNFSF13BQ9Y275 285 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 USP20Q9Y2K6 914 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 CFAP47Q6ZTR5 3102 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 EML5Q05BV3 1969 aa11.16□□□□□ -0.62
DDR1-276ENST00000514534 NCANO14594 1321 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 PHLPP2Q6ZVD8 1323 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 A0A1W2PRU2 124 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 ARHGEF35A5YM69 484 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 K7ERI5 159 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 EPB41L2O43491 1005 aaKnown RBP11.15□□□□□ -0.62
DDR1-276ENST00000514534 FGF19O95750 216 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 SPATA31C1P0DKV0 1188 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 MCM4P33991 863 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 FXR2P51116 673 aaKnown RBP eCLIP11.15□□□□□ -0.62
DDR1-276ENST00000514534 EPHB3P54753 998 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 ACAP1Q15027 740 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 CCDC6Q16204 474 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 PLA2G2CQ5R387 149 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 NT5DC1Q5TFE4 455 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 RNF43Q68DV7 783 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 TXNDC11Q6PKC3 985 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 CATSPER3Q86XQ3 398 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 ARID3BQ8IVW6 561 aaPredicted RBP11.15□□□□□ -0.62
DDR1-276ENST00000514534 ERMNQ8TAM6 284 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 DDX12PQ92771 950 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 KIFAP3Q92845 792 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 ACAP3Q96P50 834 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 POLR3CQ9BUI4 534 aaPredicted RBP11.15□□□□□ -0.62
DDR1-276ENST00000514534 RXFP3Q9NSD7 469 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 GJB4Q9NTQ9 266 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 GTSE1Q9NYZ3 720 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 ZMIZ1Q9ULJ6 1067 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 SLC8A2Q9UPR5 921 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 YIPF1Q9Y548 306 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 ATRXP46100 2492 aa11.15□□□□□ -0.62
DDR1-276ENST00000514534 TMEM8BA6NDV4 472 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 FAM205CA6NFA0 338 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 MED24O75448 989 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 KCNE1P15382 129 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 MPLP40238 635 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 OSTNP61366 133 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 SCRN1Q12765 414 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 NR5A1Q13285 461 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 ZNF568Q3ZCX4 644 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 ARHGAP15Q53QZ3 475 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 WDR44Q5JSH3 913 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 PSAPL1Q6NUJ1 521 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 KBTBD6Q86V97 674 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 CAMKK1Q8N5S9 505 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 CEP120Q8N960 986 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
DDR1-276ENST00000514534 BEST2Q8NFU1 509 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
DDR1-276ENST00000514534 TNFRSF25Q93038 417 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 RSPRY1Q96DX4 576 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 ZC3H10Q96K80 434 aaKnown RBP11.14□□□□□ -0.63
DDR1-276ENST00000514534 MTMR9Q96QG7 549 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
DDR1-276ENST00000514534 TM6SF1Q9BZW5 370 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 CDT1Q9H211 546 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 C2orf42Q9NWW7 574 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 ORC3Q9UBD5 711 aaPredicted RBP11.14□□□□□ -0.63
DDR1-276ENST00000514534 PCDHB8Q9UN66 801 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 ASB3Q9Y575 518 aa11.14□□□□□ -0.63
DDR1-276ENST00000514534 ATG2BQ96BY7 2078 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 C1QTNF9BB2RNN3 333 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 C1QTNF9P0C862 333 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 MUTP22033 750 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 RPA1P27694 616 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 ALDH1A3P47895 512 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 NOVA1P51513 510 aaKnown RBP11.13□□□□□ -0.63
DDR1-276ENST00000514534 YWHAHQ04917 246 aaPredicted RBP11.13□□□□□ -0.63
DDR1-276ENST00000514534 KARSQ15046 597 aaKnown RBP11.13□□□□□ -0.63
DDR1-276ENST00000514534 DAB2IPQ5VWQ8 1189 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 RNF19BQ6ZMZ0 732 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 TMC8Q8IU68 726 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 TTC8Q8TAM2 541 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 BPIFB1Q8TDL5 484 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 ZMAT2Q96NC0 199 aaKnown RBP11.13□□□□□ -0.63
DDR1-276ENST00000514534 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 TMEM209Q96SK2 561 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 ACO2Q99798 780 aaKnown RBP11.13□□□□□ -0.63
DDR1-276ENST00000514534 EDEM2Q9BV94 578 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 KIFC3Q9BVG8 833 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 LRRC3Q9BY71 257 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 MRPL4Q9BYD3 311 aaKnown RBP11.13□□□□□ -0.63
DDR1-276ENST00000514534 ATXN3LQ9H3M9 355 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 PDRG1Q9NUG6 133 aa11.13□□□□□ -0.63
DDR1-276ENST00000514534 THG1LQ9NWX6 298 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms