RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	DNAJC18	Q9H819	358 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	PTTG2	Q9NZH5	202 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	KANSL3	Q9P2N6	904 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	MAGEB2	O15479	319 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	CIB2	O75838	187 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	AKR1B1	P15121	316 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	LMNB1	P20700	586 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	SLC35G1	Q2M3R5	365 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	ZNF568	Q3ZCX4	644 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	MMEL1	Q495T6	779 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	KCTD21	Q4G0X4	260 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	SFT2D3	Q587I9	215 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	C6orf163	Q5TEZ5	329 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	DPY19L2P1	Q6NXN4	242 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	KLHDC10	Q6PID8	442 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	ACAD11	Q709F0	780 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	LRRC6	Q86X45	466 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	DGKH	Q86XP1	1220 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	GRIP2	Q9C0E4	1043 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	BARHL2	Q9NY43	387 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	ANKFY1	Q9P2R3	1169 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	NENF	Q9UMX5	172 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582		A0A1W2PPM1	405 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	GOLGA8R	I6L899	631 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	VILL	O15195	856 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	HNRNPCL1	O60812	293 aa	Known RBP	11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	PDE5A	O76074	875 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	FAM13A	O94988	1023 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	ALAS1	P13196	640 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	GYS1	P13807	737 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	CASP4	P49662	377 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	CASP5	P51878	434 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	ARFIP2	P53365	341 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	HIRA	P54198	1017 aa	Predicted RBP	11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	AQP4	P55087	323 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	MAP3K10	Q02779	954 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	TMEM110	Q86TL2	294 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	TRIM50	Q86XT4	487 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	ABHD8	Q96I13	439 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	PANX3	Q96QZ0	392 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	STK33	Q9BYT3	514 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	PCIF1	Q9H4Z3	704 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	SH3GLB2	Q9NR46	395 aa		11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.76	□□□□□ -0.53
PDCD6-210	ENST00000513582	CLRN2	A0PK11	232 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	DKC1	O60832	514 aa	Known RBP eCLIP	11.75	□□□□□ -0.53	1e-7	■■■■■ 36.5
PDCD6-210	ENST00000513582	ATF2	P15336	505 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	HSPA6	P17066	643 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	ADRA1D	P25100	572 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	CRABP2	P29373	138 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	OXCT1	P55809	520 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	DCTN2	Q13561	401 aa	Known RBP	11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	NCOA4	Q13772	614 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	DRAP1	Q14919	205 aa	Predicted RBP	11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	C12orf60	Q5U649	245 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	KLHL35	Q6PF15	583 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	C1orf228	Q6PIY5	440 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	TRABD2A	Q86V40	505 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	SNF8	Q96H20	258 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	KLF6	Q99612	283 aa	Predicted RBP	11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	USP29	Q9HBJ7	922 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	CHST7	Q9NS84	486 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	CCDC88A	Q3V6T2	1871 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	SMIM31	A0A1B0GVY4	71 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	DNAJC6	O75061	913 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	AKAP3	O75969	853 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	SULT2A1	Q06520	285 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	RGS9BP	Q6ZS82	235 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	TREML1	Q86YW5	311 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	SHKBP1	Q8TBC3	707 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	C17orf50	Q8WW18	174 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	GAB3	Q8WWW8	586 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	CCDC28B	Q9BUN5	200 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	TUT1	Q9H6E5	874 aa	Known RBP	11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	KIAA1586	Q9HCI6	787 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	SIX2	Q9NPC8	291 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	NCAN	O14594	1321 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	COL5A2	P05997	1499 aa	Predicted RBP	11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	KCP	Q6ZWJ8	1503 aa		11.75	□□□□□ -0.53
PDCD6-210	ENST00000513582	ADCY3	O60266	1144 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	ZFX	P17010	805 aa	Predicted RBP	11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	PCSK6	P29122	969 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	HOXD12	P35452	270 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	NR1H3	Q13133	447 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	EPHA7	Q15375	998 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	MAP7D1	Q3KQU3	841 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	PAOX	Q6QHF9	649 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	TIAM2	Q8IVF5	1701 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	ARHGAP24	Q8N264	748 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	DENND1A	Q8TEH3	1009 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	KCTD10	Q9H3F6	313 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	PRDM16	Q9HAZ2	1276 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	KCNQ5	Q9NR82	932 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	LGALS13	Q9UHV8	139 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	FAF1	Q9UNN5	650 aa	Predicted RBP	11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	DOLK	Q9UPQ8	538 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	TBC1D30	Q9Y2I9	924 aa		11.74	□□□□□ -0.53
PDCD6-210	ENST00000513582	ZMYM2	Q9UBW7	1377 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms