RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 OSBPL7Q9BZF2 842 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 ZNF518BQ9C0D4 1074 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 ANAPC5Q9UJX4 755 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 NUB1Q9Y5A7 615 aa9.82□□□□□ -0.84
CPNE4-210ENST00000512332 BRCA1P38398 1863 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 DOCK5Q9H7D0 1870 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 GSTTP1A0A1W2PQM5 241 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 TMEM191CA6NGB0 347 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 TLR3O15455 904 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 THAP12O43422 761 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 TOM1L1O75674 476 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 ASS1P00966 412 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 TMEM191BP0C7N4 346 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 ITGA8P53708 1063 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 TAS2R40P59535 323 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 COPS2P61201 443 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 MCL1Q07820 350 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 SNX1Q13596 522 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 NEDD9Q14511 834 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 SURF1Q15526 300 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 UBAP2Q5T6F2 1119 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 ANGEL2Q5VTE6 544 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 FAM160B1Q5W0V3 765 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 LBX2Q6XYB7 198 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 EXOC3L1Q86VI1 746 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 EXOC8Q8IYI6 725 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 ANKS4BQ8N8V4 417 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 IPO4Q8TEX9 1081 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 ZNF606Q8WXB4 792 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 ATG4AQ8WYN0 398 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 CCT6BQ92526 530 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 SELENOSQ9BQE4 189 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 C11orf70Q9BRQ4 267 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 IMPG2Q9BZV3 1241 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 R3HDM2Q9Y2K5 976 aaKnown RBP9.81□□□□□ -0.84
CPNE4-210ENST00000512332 LCTP09848 1927 aa9.81□□□□□ -0.84
CPNE4-210ENST00000512332 TCRBV5S1A1TA0A578 114 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 GAS2O43903 313 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 FAM189A1O60320 539 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 FARP2O94887 1054 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CALB1P05937 261 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 HNRNPH1P31943 449 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 PTPN7P35236 360 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ADCY8P40145 1251 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ALDH5A1P51649 535 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 TAP1Q03518 808 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CAPSQ13938 189 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CNGA2Q16280 664 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ZNF365Q70YC5 407 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC25Q86WR0 208 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 RIOX2Q8IUF8 465 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC13Q8IYE1 715 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ANKRD35Q8N283 1001 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC197Q8NCU1 140 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 OR5B17Q8NGF7 314 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 RBM41Q96IZ5 413 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 FAM84AQ96KN4 292 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 FAM167AQ96KS9 214 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 PCYT2Q99447 389 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 LGALS13Q9UHV8 139 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 GJA3Q9Y6H8 435 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 GOLGA6L7A0A1B0GV03 622 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 H0YHG0 523 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 MSCO60682 206 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CFHP08603 1231 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 UBA1P22314 1058 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 KLRC2P26717 231 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CDH5P33151 784 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CHKAP35790 457 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 SLCO1A2P46721 670 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 STAT5BP51692 787 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 NFX1Q12986 1120 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 SGSM1Q2NKQ1 1148 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ANKRD20A8PQ5CZ79 823 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ZBTB41Q5SVQ8 909 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 IER5Q5VY09 327 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CDCA2Q69YH5 1023 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC50Q8IVM0 306 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 SEPT1Q8WYJ6 367 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 DDX23Q9BUQ8 820 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 MRPL4Q9BYD3 311 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 CCDC113Q9H0I3 377 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ANKFY1Q9P2R3 1169 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 RGS17Q9UGC6 210 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 DRG1Q9Y295 367 aaKnown RBP9.8□□□□□ -0.84
CPNE4-210ENST00000512332 ACTL7BQ9Y614 415 aa9.8□□□□□ -0.84
CPNE4-210ENST00000512332 SMIM23A6NLE4 172 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 NDC80O14777 642 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 RASSF9O75901 435 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 ACSL3O95573 720 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 EDN1P05305 212 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 ABHD2P08910 425 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 EIF4BP23588 611 aaKnown RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 CNTN2Q02246 1040 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 MXD4Q14582 209 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-210ENST00000512332 STAT4Q14765 748 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 LONRF1Q17RB8 773 aa9.79□□□□□ -0.84
CPNE4-210ENST00000512332 HIBCHQ6NVY1 386 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms