RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 FBXL5Q9UKA1 691 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 MAFFQ9ULX9 164 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 ADAMTS9Q9P2N4 1935 aa13.21□□□□□ -0.3
COPS4-210ENST00000511708 NID2Q14112 1375 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 CCDC194A0A1B0GVG4 234 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 A0A1W2PRU2 124 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 UPK3BL1B0FP48 263 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 UPK3BL2E5RIL1 263 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 M0R2N6 131 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 TRDMT1O14717 391 aaKnown RBP13.2□□□□□ -0.3
COPS4-210ENST00000511708 SYN3O14994 580 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 SLC37A4O43826 429 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 ARPP19P56211 112 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 SIM1P81133 766 aaPredicted RBP13.2□□□□□ -0.3
COPS4-210ENST00000511708 PLCB2Q00722 1185 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 SCAPQ12770 1279 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 ITPRIPL2Q3MIP1 535 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 DHX32Q7L7V1 743 aaKnown RBP13.2□□□□□ -0.3
COPS4-210ENST00000511708 RAB44Q7Z6P3 723 aaPredicted RBP13.2□□□□□ -0.3
COPS4-210ENST00000511708 GPIHBP1Q8IV16 184 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 FAM20AQ96MK3 541 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 FZD8Q9H461 694 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 ZSWIM4Q9H7M6 989 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 GOLGA2P5Q9HBQ8 144 aa13.2□□□□□ -0.3
COPS4-210ENST00000511708 PRMT7Q9NVM4 692 aaPredicted RBP13.2□□□□□ -0.3
COPS4-210ENST00000511708 EVLQ9UI08 416 aaPredicted RBP13.2□□□□□ -0.3
COPS4-210ENST00000511708 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
COPS4-210ENST00000511708 CITO14578 2027 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 H7C4K7 107 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 N4BP3O15049 544 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 RNF40O75150 1001 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 DGAT1O75907 488 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 GRSF1Q12849 480 aaKnown RBP eCLIP13.19□□□□□ -0.3
COPS4-210ENST00000511708 SEMA3BQ13214 749 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 NTRK3Q16288 839 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 GLRA4Q5JXX5 417 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 CDCA2Q69YH5 1023 aaPredicted RBP13.19□□□□□ -0.3
COPS4-210ENST00000511708 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 CHCHD4Q8N4Q1 142 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 BEST2Q8NFU1 509 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 DYDC2Q96IM9 177 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 DNAJC25Q9H1X3 360 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 DDX25Q9UHL0 483 aaKnown RBP13.19□□□□□ -0.3
COPS4-210ENST00000511708 PLXND1Q9Y4D7 1925 aa13.19□□□□□ -0.3
COPS4-210ENST00000511708 ZNF462Q96JM2 2506 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 PTPRBP23467 1997 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 PRAMEF12O95522 483 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 APBB3O95704 486 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 EGFP01133 1207 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 WEE1P30291 646 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 GBP1P32455 592 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 SOX4Q06945 474 aaPredicted RBP13.18□□□□□ -0.3
COPS4-210ENST00000511708 CTTNQ14247 550 aaKnown RBP13.18□□□□□ -0.3
COPS4-210ENST00000511708 SYT13Q7L8C5 426 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 C11orf74Q86VG3 221 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
COPS4-210ENST00000511708 SLKQ9H2G2 1235 aaPredicted RBP13.18□□□□□ -0.3
COPS4-210ENST00000511708 SCUBE2Q9NQ36 999 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 TPCN1Q9ULQ1 816 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 YIPF1Q9Y548 306 aa13.18□□□□□ -0.3
COPS4-210ENST00000511708 EIF4E1BA6NMX2 242 aaKnown RBP13.17□□□□□ -0.3
COPS4-210ENST00000511708 DPYSL4O14531 572 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 LYPLA2O95372 231 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 VNN2O95498 520 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 FAM193AP78312 1265 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 LMAN2Q12907 356 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 PTPAQ15257 358 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 NPY5RQ15761 445 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 CTXN3Q4LDR2 81 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 EEF1DP3Q658K8 133 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 RNF19BQ6ZMZ0 732 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 GAREM2Q75VX8 874 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 HAS1Q92839 578 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 POLR3FQ9H1D9 316 aaPredicted RBP13.17□□□□□ -0.3
COPS4-210ENST00000511708 FBRSL1Q9HCM7 1045 aaKnown RBP13.17□□□□□ -0.3
COPS4-210ENST00000511708 HPS4Q9NQG7 708 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 PCDHA4Q9UN74 947 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 CEP192Q8TEP8 1941 aa13.17□□□□□ -0.3
COPS4-210ENST00000511708 PCDH15Q96QU1 1955 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 MYO18BQ8IUG5 2567 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
COPS4-210ENST00000511708 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 SLITRK3O94933 977 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 SEC24BO95487 1268 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 EDN1P05305 212 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 BCKDHBP21953 392 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
COPS4-210ENST00000511708 MCM2P49736 904 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 NLRP5P59047 1200 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 AKAP17AQ02040 695 aaKnown RBP13.16□□□□□ -0.3
COPS4-210ENST00000511708 CYP4A11Q02928 519 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 DMC1Q14565 340 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 ZNF423Q2M1K9 1284 aa13.16□□□□□ -0.3
COPS4-210ENST00000511708 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms