RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 KRT12Q99456 494 aa8.38□□□□□ -1.07
SSBP2-213ENST00000509743 MRPL47Q9HD33 250 aaKnown RBP8.38□□□□□ -1.07
SSBP2-213ENST00000509743 CISHQ9NSE2 258 aa8.38□□□□□ -1.07
SSBP2-213ENST00000509743 SMARCAL1Q9NZC9 954 aa8.38□□□□□ -1.07
SSBP2-213ENST00000509743 GJD2Q9UKL4 321 aa8.38□□□□□ -1.07
SSBP2-213ENST00000509743 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
SSBP2-213ENST00000509743 CEP83Q9Y592 693 aa8.38□□□□□ -1.07
SSBP2-213ENST00000509743 POLR2AP24928 1970 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 C17orf102A2RUQ5 167 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 TMEM110-MUSTN1A8MSY1 372 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 ATMINO43313 823 aaPredicted RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 DUSP11O75319 330 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 GPR32O75388 356 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 RPLP2P05387 115 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 KRT19P08727 400 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 DARSP14868 501 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 CD58P19256 250 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 HOXC8P31273 242 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 CDH5P33151 784 aaPredicted RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 MAN1A1P33908 653 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 TNNT3P45378 269 aaPredicted RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 YARSP54577 528 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 ADAM17P78536 824 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 RBP5P82980 135 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 LACTBP83111 547 aaPredicted RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 TAP1Q03518 808 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 MESDQ14696 234 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 CASP8Q14790 479 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 CCL14Q16627 93 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 KIZQ2M2Z5 673 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 SLC10A6Q3KNW5 377 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 PLEKHA7Q6IQ23 1121 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 TAF2Q6P1X5 1199 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 EMBQ6PCB8 327 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 MAATS1Q7Z4T9 603 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 AENQ8WTP8 325 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 ZNF606Q8WXB4 792 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 CPA5Q8WXQ8 436 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 CYFIP2Q96F07 1278 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 RUNDC3BQ96NL0 473 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 FAM49AQ9H0Q0 323 aaPredicted RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 GDF3Q9NR23 364 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 PARVAQ9NVD7 372 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 ADAM22Q9P0K1 906 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 DMGDHQ9UI17 866 aaKnown RBP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 SIX4Q9UIU6 781 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 ANAPC7Q9UJX3 599 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSBP2-213ENST00000509743 PCDHA3Q9Y5H8 950 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 KIAA1217Q5T5P2 1943 aa8.37□□□□□ -1.07
SSBP2-213ENST00000509743 PLXNB2O15031 1838 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 SPDYE4A6NLX3 237 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 MYO1FO00160 1098 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 CSDE1O75534 798 aaKnown RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 SASH3O75995 380 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 PROSCO94903 275 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 HEXIM1O94992 359 aaKnown RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 NPTXRO95502 500 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 FGGP02679 453 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 ITGB3P05106 788 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 WEE2P0C1S8 567 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 CYBAP13498 195 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 MMP8P22894 467 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 RRM1P23921 792 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 PEX5P50542 639 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 CRYBB1P53674 252 aaPredicted RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 RWDD2BP57060 319 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 NKX3-2P78367 333 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 MYO1EQ12965 1108 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 PTP4A2Q12974 167 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 CUL1Q13616 776 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 PTPROQ16827 1216 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 WDR72Q3MJ13 1102 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 DCAF12L1Q5VU92 463 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 SCARA5Q6ZMJ2 495 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 MMS22LQ6ZRQ5 1243 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 KLHL7Q8IXQ5 586 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 TMEM192Q8IY95 271 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 REM2Q8IYK8 340 aaPredicted RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 C7orf31Q8N865 590 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 SMC1BQ8NDV3 1235 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 MAIP1Q8WWC4 291 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 ALG3Q92685 438 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 CAVIN3Q969G5 261 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 SNX27Q96L92 541 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 C11orf70Q9BRQ4 267 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 MTG1Q9BT17 334 aaPredicted RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 LHX5Q9H2C1 402 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 SPC25Q9HBM1 224 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 DPP3Q9NY33 737 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 NXF1Q9UBU9 619 aaKnown RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 MTUS1Q9ULD2 1270 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 KIAA1257Q9ULG3 409 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 STRIP2Q9ULQ0 834 aa8.36□□□□□ -1.07
SSBP2-213ENST00000509743 ABT1Q9ULW3 272 aaKnown RBP8.36□□□□□ -1.07
SSBP2-213ENST00000509743 FAM187AA6NFU0 413 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms