RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
LSM6-204ENST00000504181 PTPN13Q12923 2485 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 TBX3O15119 743 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 ATXN7O15265 892 aaPredicted RBP13.84□□□□□ -0.19
LSM6-204ENST00000504181 ARHGAP6O43182 974 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 RECQL4O94761 1208 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 ATXN3P54252 364 aaPredicted RBP13.84□□□□□ -0.19
LSM6-204ENST00000504181 PLCB2Q00722 1185 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 CAPSQ13938 189 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 PTPAQ15257 358 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 CD300LGQ6UXG3 332 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 SYT13Q7L8C5 426 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 C3orf58Q8NDZ4 430 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 CHFRQ96EP1 664 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 CAMK1GQ96NX5 476 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 MTRQ99707 1265 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 ZMYND12Q9H0C1 365 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 GOLGA2P5Q9HBQ8 144 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 FBRSL1Q9HCM7 1045 aaKnown RBP13.84□□□□□ -0.19
LSM6-204ENST00000504181 TMEM74BQ9NUR3 256 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 WRAP73Q9P2S5 460 aaPredicted RBP13.84□□□□□ -0.19
LSM6-204ENST00000504181 SPTA1P02549 2419 aa13.84□□□□□ -0.19
LSM6-204ENST00000504181 A0A1B0GUA9 196 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 ESYT2A0FGR8 921 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 TRDMT1O14717 391 aaKnown RBP13.83□□□□□ -0.2
LSM6-204ENST00000504181 TRAPPC3O43617 180 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 OPHN1O60890 802 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 PRAMEF12O95522 483 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 U2AF2P26368 475 aaKnown RBP eCLIP13.83□□□□□ -0.2
LSM6-204ENST00000504181 QARSP47897 775 aaKnown RBP13.83□□□□□ -0.2
LSM6-204ENST00000504181 TFDP1Q14186 410 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 MXD4Q14582 209 aaPredicted RBP13.83□□□□□ -0.2
LSM6-204ENST00000504181 TRIP6Q15654 476 aaKnown RBP13.83□□□□□ -0.2
LSM6-204ENST00000504181 RTN1Q16799 776 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 GLRA4Q5JXX5 417 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 TPGS2Q68CL5 300 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 APOA5Q6Q788 366 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
LSM6-204ENST00000504181 TMC8Q8IU68 726 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 PIP4K2CQ8TBX8 421 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 BPIFB1Q8TDL5 484 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 LRRC3Q9BY71 257 aa13.83□□□□□ -0.2
LSM6-204ENST00000504181 EML1O00423 815 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 CFIP05156 583 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 ABCG1P45844 678 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 PSMD2Q13200 908 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 MAPK6Q16659 721 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 PFKFB3Q16875 520 aaPredicted RBP13.82□□□□□ -0.2
LSM6-204ENST00000504181 NAIF1Q69YI7 327 aaPredicted RBP13.82□□□□□ -0.2
LSM6-204ENST00000504181 SLC23A3Q6PIS1 610 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 SGMS1Q86VZ5 419 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 TSTD1Q8NFU3 115 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 OR2I1PQ8NGU4 316 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 ASAP3Q8TDY4 903 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 ACDQ96AP0 544 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 XPNPEP1Q9NQW7 623 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 OBP2AQ9NY56 170 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 FBXL5Q9UKA1 691 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 YIPF1Q9Y548 306 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 PPME1Q9Y570 386 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 PTPRQQ9UMZ3 2332 aa13.82□□□□□ -0.2
LSM6-204ENST00000504181 COL6A6A6NMZ7 2263 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 USP9XQ93008 2570 aaPredicted RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 A0A087WV48 116 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 OTOL1A6NHN0 477 aaPredicted RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 PRR29P0C7W0 189 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 CD59P13987 128 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 DRD1P21728 446 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 MCM2P49736 904 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 RUNX3Q13761 415 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 HNRNPDQ14103 355 aaKnown RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 UPP1Q16831 310 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 XKR9Q5GH70 373 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 GPR158Q5T848 1215 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 ANO7Q6IWH7 933 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 SYT12Q8IV01 421 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 TMEFF1Q8IYR6 380 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 DAGLBQ8NCG7 672 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 DCBLD2Q96PD2 775 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 POLR3CQ9BUI4 534 aaPredicted RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 HPS4Q9NQG7 708 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 GKN1Q9NS71 199 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 IGSF5Q9NSI5 407 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 AFF4Q9UHB7 1163 aaKnown RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 CIZ1Q9ULV3 898 aaPredicted RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 PCDHB9Q9Y5E1 797 aa13.81□□□□□ -0.2
LSM6-204ENST00000504181 RBM8AQ9Y5S9 174 aaKnown RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 MYO18AQ92614 2054 aaKnown RBP13.81□□□□□ -0.2
LSM6-204ENST00000504181 MGAQ8IWI9 3026 aa13.8□□□□□ -0.2
LSM6-204ENST00000504181 H7C4K7 107 aa13.8□□□□□ -0.2
LSM6-204ENST00000504181 ZBTB39O15060 712 aa13.8□□□□□ -0.2
LSM6-204ENST00000504181 DKC1O60832 514 aaKnown RBP eCLIP13.8□□□□□ -0.2
LSM6-204ENST00000504181 TDP2O95551 362 aa13.8□□□□□ -0.2
LSM6-204ENST00000504181 CPB1P15086 417 aa13.8□□□□□ -0.2
LSM6-204ENST00000504181 GNA11P29992 359 aa13.8□□□□□ -0.2
LSM6-204ENST00000504181 YWHABP31946 246 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms