RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TNFSF9P41273 254 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 SLC26A2P50443 739 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 ZNF132P52740 706 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 CAV1Q03135 178 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 MCL1Q07820 350 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 TFDP1Q14186 410 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 NLRP14Q86W24 1093 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 C10orf67Q8IYJ2 551 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 KATNAL2Q8IYT4 538 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 C3orf20Q8ND61 904 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 ATL2Q8NHH9 583 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 FEZF2Q8TBJ5 459 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 TLCD1Q96CP7 247 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 FAM212AQ96EL1 285 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 MTMR12Q9C0I1 747 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 STMN4Q9H169 189 aaPredicted RBP11.77□□□□□ -0.52
CMSS1-208ENST00000496116 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 AGTPBP1Q9UPW5 1226 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 RGS16O15492 202 aaPredicted RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 FAM189A1O60320 539 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CAND2O75155 1236 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CNMDO75829 334 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CST3P01034 146 aaPredicted RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 SHBGP04278 402 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CFHP08603 1231 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 TMEM191BP0C7N4 346 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 SSR1P43307 286 aaKnown RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 SNX1Q13596 522 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 PTK6Q13882 451 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 LLGL1Q15334 1064 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 HSDL1Q3SXM5 330 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 TRMT10CQ7L0Y3 403 aaKnown RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 DHX37Q8IY37 1157 aaKnown RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 EXD1Q8NHP7 514 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 MYCBPAPQ8TBZ2 947 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF473Q8WTR7 871 aaKnown RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 RNF25Q96BH1 459 aaPredicted RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 SNF8Q96H20 258 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CCDC114Q96M63 670 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 SPATA33Q96N06 139 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CCT8L2Q96SF2 557 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 DCLK3Q9C098 648 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 ZNF518BQ9C0D4 1074 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 NIF3L1Q9GZT8 377 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 SEMA4AQ9H3S1 761 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 PPANQ9NQ55 473 aaKnown RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CHST7Q9NS84 486 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 CPSF3Q9UKF6 684 aaKnown RBP11.77□□□□□ -0.53
CMSS1-208ENST00000496116 FAM169AQ9Y6X4 670 aa11.77□□□□□ -0.53
CMSS1-208ENST00000496116 ATXN2Q99700 1313 aaKnown RBP11.76□□□□□ -0.53
CMSS1-208ENST00000496116 RIPK2O43353 540 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 ARIH2O95376 493 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 PGK2P07205 417 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 PAEPP09466 180 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 RALAP11233 206 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 FGFR4P22455 802 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 MMP8P22894 467 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 YWHAEP62258 255 aaKnown RBP11.76□□□□□ -0.53
CMSS1-208ENST00000496116 LLGL2Q6P1M3 1020 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 DLK2Q6UY11 383 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 LRRC71Q8N4P6 559 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 UBR7Q8N806 425 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 BBOF1Q8ND07 529 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 ANKRD36BP1Q96IX9 119 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 MMP19Q99542 508 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 TMEM109Q9BVC6 243 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 SMARCAD1Q9H4L7 1026 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 USTQ9Y2C2 406 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 CEP83Q9Y592 693 aa11.76□□□□□ -0.53
CMSS1-208ENST00000496116 TLDC2A0PJX2 215 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 GMNCA6NCL1 334 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 SPDYE5A6NIY4 337 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TTLL13PA6NNM8 815 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TRIM66O15016 1216 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 AGTP01019 485 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TNNC2P02585 160 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ATF2P15336 505 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 OSBPP22059 807 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TMOD1P28289 359 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 MAGEA9P43362 315 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 SEC24CP53992 1094 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 MYL6P60660 151 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TAP1Q03518 808 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 KLF1Q13351 362 aaPredicted RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 PLCB4Q15147 1175 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 CCNG2Q16589 344 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 MPZL3Q6UWV2 235 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TSHZ1Q6ZSZ6 1077 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 CCDC25Q86WR0 208 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TRIM50Q86XT4 487 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 TMEM35BQ8NCS4 154 aa11.75□□□□□ -0.53
CMSS1-208ENST00000496116 RBM41Q96IZ5 413 aaKnown RBP11.75□□□□□ -0.53
CMSS1-208ENST00000496116 SCLT1Q96NL6 688 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms