RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 SLC2A4RGQ9NR83 387 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 FAM86C1Q9NVL1 165 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 KBTBD4Q9NVX7 518 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 CEP72Q9P209 647 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 DPP7Q9UHL4 492 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 CDH7Q9ULB5 785 aa12.86□□□□□ -0.35
SRSF4-204ENST00000489898 UBQLN1Q9UMX0 589 aaKnown RBP12.86□□□□□ -0.35
SRSF4-204ENST00000489898 H0YCG3 227 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 GALR2O43603 387 aaPredicted RBP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 SCP2P22307 547 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 GBP2P32456 591 aaPredicted RBP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 ACOT2P49753 483 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 LILRA4P59901 499 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 PPP2R3AQ06190 1150 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 UVSSAQ2YD98 709 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 LIN9Q5TKA1 542 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 C9orf57Q5W0N0 161 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 ASTLQ6HA08 431 aaPredicted RBP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 CNNM4Q6P4Q7 775 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 RNF19BQ6ZMZ0 732 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 SUGP1Q8IWZ8 645 aaKnown RBP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 ZNF687Q8N1G0 1237 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 TMEM87AQ8NBN3 555 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 GPR152Q8TDT2 470 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 TCHPQ9BT92 498 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 MSTO1Q9BUK6 570 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 PLA2G2FQ9BZM2 168 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 ZDHHC9Q9Y397 364 aa12.85□□□□□ -0.35
SRSF4-204ENST00000489898 TIMM13Q9Y5L4 95 aaPredicted RBP12.85□□□□□ -0.35
SRSF4-204ENST00000489898 MTMR11A4FU01 709 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 TBCAO75347 108 aaKnown RBP12.84□□□□□ -0.35
SRSF4-204ENST00000489898 CYP11A1P05108 521 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 RHOP08100 348 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 CFHP08603 1231 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 MCM4P33991 863 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 MRE11P49959 708 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 CCDC142Q17RM4 750 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 L1TD1Q5T7N2 865 aaKnown RBP12.84□□□□□ -0.35
SRSF4-204ENST00000489898 ZNF280DQ6N043 979 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 RTL10Q7L3V2 364 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 SIX5Q8N196 739 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 ING5Q8WYH8 240 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 STAMQ92783 540 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 RSPRY1Q96DX4 576 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 BICD1Q96G01 975 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 PKMYT1Q99640 499 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 CBWD1Q9BRT8 395 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 TRIM9Q9C026 710 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 ZSCAN16Q9H4T2 348 aaPredicted RBP12.84□□□□□ -0.35
SRSF4-204ENST00000489898 SEL1LQ9UBV2 794 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 SIX4Q9UIU6 781 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 KCNH3Q9ULD8 1083 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 DERAQ9Y315 318 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 C2CD2Q9Y426 696 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 YIPF1Q9Y548 306 aa12.84□□□□□ -0.35
SRSF4-204ENST00000489898 GPR179Q6PRD1 2367 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 ARNTLO00327 626 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 TRAPPC3O43617 180 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 PPP6R2O75170 966 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 YEATS4O95619 227 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 F13A1P00488 732 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 TYMPP19971 482 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 CASP1P29466 404 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 CLCN5P51795 746 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 PTPN5P54829 565 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 PABPC1LQ4VXU2 614 aaKnown RBP12.83□□□□□ -0.36
SRSF4-204ENST00000489898 WDR44Q5JSH3 913 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 TPGS2Q68CL5 300 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
SRSF4-204ENST00000489898 CCDC105Q8IYK2 499 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 ZSWIM3Q96MP5 696 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 WNT16Q9UBV4 365 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 AFF4Q9UHB7 1163 aaKnown RBP12.83□□□□□ -0.36
SRSF4-204ENST00000489898 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
SRSF4-204ENST00000489898 ZFP37Q9Y6Q3 630 aaPredicted RBP12.83□□□□□ -0.36
SRSF4-204ENST00000489898 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 PROB1E7EW31 1015 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 LRRN2O75325 713 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 ATF6P18850 670 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 NUBP1P53384 320 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 POU5F1Q01860 360 aaKnown RBP12.82□□□□□ -0.36
SRSF4-204ENST00000489898 ADCY1Q08828 1119 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 CTXN3Q4LDR2 81 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 STXBP5Q5T5C0 1151 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 RRAGBQ5VZM2 374 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 LIMS2Q7Z4I7 341 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 MAML2Q8IZL2 1156 aaPredicted RBP12.82□□□□□ -0.36
SRSF4-204ENST00000489898 PDILTQ8N807 584 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 SHKBP1Q8TBC3 707 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 SAAL1Q96ER3 474 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 SENP8Q96LD8 212 aa12.82□□□□□ -0.36
SRSF4-204ENST00000489898 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms