RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 PEX3P56589 373 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 SARNPP82979 210 aaKnown RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 DSG1Q02413 1049 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 SOX4Q06945 474 aaPredicted RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 TCF15Q12870 199 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 MAPK7Q13164 816 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 NAB2Q15742 525 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 MAPK6Q16659 721 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ZNF568Q3ZCX4 644 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ZC3H12AQ5D1E8 599 aaKnown RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ATAT1Q5SQI0 421 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ATF7IP2Q5U623 682 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 FAM171A1Q5VUB5 890 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 KIAA0319Q5VV43 1072 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 LYPD8Q6UX82 237 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 GPR149Q86SP6 731 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 FMNL3Q8IVF7 1028 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 HACE1Q8IYU2 909 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 TMEM105Q8N8V8 129 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 GPATCH11Q8N954 259 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 IGSF22Q8N9C0 903 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 FLCNQ8NFG4 579 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 SMG7Q92540 1137 aaKnown RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ERCC4Q92889 916 aaPredicted RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ZNF707Q96C28 371 aaPredicted RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 MFSD14AQ96MC6 490 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 NECTIN4Q96NY8 510 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 MYADMQ96S97 322 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 FUCA2Q9BTY2 467 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 C2orf40Q9H1Z8 148 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 CDT1Q9H211 546 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 KCNH6Q9H252 994 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 FZD8Q9H461 694 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ZSCAN16Q9H4T2 348 aaPredicted RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 ARGLU1Q9NWB6 273 aaPredicted RBP6.33□□□□□ -1.4
CNOT9-207ENST00000489687 KANSL3Q9P2N6 904 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 PCDHGC3Q9UN70 934 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 SORCS3Q9UPU3 1222 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 SLC27A5Q9Y2P5 690 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 GIT1Q9Y2X7 761 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 CACNA1IQ9P0X4 2223 aa6.33□□□□□ -1.4
CNOT9-207ENST00000489687 PHLPP2Q6ZVD8 1323 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 H0Y858 1186 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 H3BQV1 296 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 ACKR2O00590 384 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 CCL16O15467 120 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 TADA2AO75478 443 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 PNMA6AP0CW24 399 aaPredicted RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 JUNDP17535 347 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 TKTP29401 623 aaKnown RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 GGCXP38435 758 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 BRCC3P46736 316 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 PLA2G4AP47712 749 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 TRAPPC10P48553 1259 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 CLCNKBP51801 687 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 GRIN1Q05586 938 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 SPAG1Q07617 926 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 DMP1Q13316 513 aaPredicted RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 TUSC3Q13454 348 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 PSMD5Q16401 504 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 FAM187BQ17R55 369 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 USP41Q3LFD5 358 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 MAP9Q49MG5 647 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 CCDC183Q5T5S1 534 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 CWF19L1Q69YN2 538 aaKnown RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 FBXO38Q6PIJ6 1188 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 BRICD5Q6PL45 260 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 RSPO2Q6UXX9 243 aaPredicted RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 THSD4Q6ZMP0 1018 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 FILIP1Q7Z7B0 1213 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 PPFIBP1Q86W92 1011 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 SCUBE3Q8IX30 993 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 CNNM3Q8NE01 707 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 ING5Q8WYH8 240 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 RSPH1Q8WYR4 309 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 KIFAP3Q92845 792 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 C18orf25Q96B23 403 aaPredicted RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 ZBTB45Q96K62 511 aaPredicted RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 IFT74Q96LB3 600 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 ZSCAN31Q96LW9 406 aaPredicted RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 PNMA5Q96PV4 448 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 ADPGKQ9BRR6 497 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 TARS2Q9BW92 718 aaKnown RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 COLEC11Q9BWP8 271 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 KCNF1Q9H3M0 494 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 MFSD1Q9H3U5 465 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 GDPD2Q9HCC8 539 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 UBN1Q9NPG3 1134 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.41e-10■■■■■ 74.5
CNOT9-207ENST00000489687 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.32□□□□□ -1.4
CNOT9-207ENST00000489687 CHST7Q9NS84 486 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 HCFC1R1Q9NWW0 138 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 TUBGCP4Q9UGJ1 667 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 POLIQ9UNA4 740 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 TSC2P49815 1807 aa6.32□□□□□ -1.4
CNOT9-207ENST00000489687 CACNA1AO00555 2505 aa6.31□□□□□ -1.4
CNOT9-207ENST00000489687 SYCE3A1L190 88 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms