RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 FAM184AQ8NB25 1140 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 BEST2Q8NFU1 509 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 ANKFY1Q9P2R3 1169 aa20.79■□□□□ 0.92
GGPS1-206ENST00000488594 NRG2O14511 850 aaPredicted RBP20.78■□□□□ 0.92
GGPS1-206ENST00000488594 MEFVO15553 781 aaPredicted RBP20.78■□□□□ 0.92
GGPS1-206ENST00000488594 OAZ2O95190 189 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 GUCY2CP25092 1073 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 CXCL12P48061 93 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 SMTNP53814 917 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 NBR1Q14596 966 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 RNF19BQ6ZMZ0 732 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 SLITRK6Q9H5Y7 841 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 YIPF1Q9Y548 306 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 TRIP11Q15643 1979 aa20.78■□□□□ 0.92
GGPS1-206ENST00000488594 HEPACAM2A8MVW5 462 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 M0QZQ0 153 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 ARNTLO00327 626 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 CLDN3O15551 220 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 LRP3O75074 770 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 CHRNB1P11230 501 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 U2AF2P26368 475 aaKnown RBP eCLIP20.77■□□□□ 0.92
GGPS1-206ENST00000488594 PRPHP41219 470 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 TEAD2Q15562 447 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 YAF2Q8IY57 180 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 KCTD17Q8N5Z5 321 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 CSGALNACT1Q8TDX6 532 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 ZBTB45Q96K62 511 aaPredicted RBP20.77■□□□□ 0.92
GGPS1-206ENST00000488594 TUBGCP4Q9UGJ1 667 aa20.77■□□□□ 0.92
GGPS1-206ENST00000488594 CHADO15335 359 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 PLS3P13797 630 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 GJA1P17302 382 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 CCNE1P24864 410 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 LRPAP1P30533 357 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 EPHB3P54753 998 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 MCL1Q07820 350 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 LRRC32Q14392 662 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 DTHD1Q6ZMT9 781 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 SPEM1Q8N4L4 309 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 TMEM161BQ8NDZ6 487 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 SHKBP1Q8TBC3 707 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 C8orf33Q9H7E9 229 aaPredicted RBP20.76■□□□□ 0.91
GGPS1-206ENST00000488594 PARD6AQ9NPB6 346 aa20.76■□□□□ 0.91
GGPS1-206ENST00000488594 OR6C75A6NL08 312 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 PP2D1A8MPX8 630 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 RETP07949 1114 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 CLTAP09496 248 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 CYP3A5P20815 502 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 CNR2P34972 360 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 AARSP49588 968 aaKnown RBP eCLIP20.75■□□□□ 0.91
GGPS1-206ENST00000488594 TOB1P50616 345 aaPredicted RBP20.75■□□□□ 0.91
GGPS1-206ENST00000488594 FCHO2Q0JRZ9 810 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 USP37Q86T82 979 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 CNTNAP3BQ96NU0 1288 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 CNTNAP3Q9BZ76 1288 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 KCND2Q9NZV8 630 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 UBQLN1Q9UMX0 589 aaKnown RBP20.75■□□□□ 0.91
GGPS1-206ENST00000488594 PCDHB6Q9Y5E3 794 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 COL4A2P08572 1712 aa20.75■□□□□ 0.91
GGPS1-206ENST00000488594 SFI1A8K8P3 1242 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 H0YCG3 227 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 XPOTO43592 962 aaKnown RBP20.74■□□□□ 0.91
GGPS1-206ENST00000488594 PAPSS2O95340 614 aaPredicted RBP20.74■□□□□ 0.91
GGPS1-206ENST00000488594 CXCL8P10145 99 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 MAPTP10636 758 aaKnown RBP20.74■□□□□ 0.91
GGPS1-206ENST00000488594 ALDH1A3P47895 512 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 SATB1Q01826 763 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 SPEM2Q0P670 501 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 GPR17Q13304 367 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 KYAT1Q16773 422 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 SEZ6Q53EL9 994 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 PRR23BQ6ZRT6 265 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 KCNK18Q7Z418 384 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 NETO1Q8TDF5 533 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 ZSCAN31Q96LW9 406 aaPredicted RBP20.74■□□□□ 0.91
GGPS1-206ENST00000488594 TSPAN18Q96SJ8 248 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 LRRC3Q9BY71 257 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 SH2B1Q9NRF2 756 aaPredicted RBP20.74■□□□□ 0.91
GGPS1-206ENST00000488594 ASB3Q9Y575 518 aa20.74■□□□□ 0.91
GGPS1-206ENST00000488594 A0A1W2PRU2 124 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 TTC26A0AVF1 554 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 FGF19O95750 216 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 CDC25AP30304 524 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 MATR3P43243 847 aaKnown RBP eCLIP20.73■□□□□ 0.91
GGPS1-206ENST00000488594 KPNA1P52294 538 aaPredicted RBP20.73■□□□□ 0.91
GGPS1-206ENST00000488594 SIM2Q14190 667 aaPredicted RBP20.73■□□□□ 0.91
GGPS1-206ENST00000488594 ZBTB6Q15916 424 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 LPAL2Q16609 132 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 TMC8Q8IU68 726 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 KIF12Q96FN5 646 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 PGLYRP2Q96PD5 576 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 MMTAG2Q9BU76 263 aaKnown RBP20.73■□□□□ 0.91
GGPS1-206ENST00000488594 CITO14578 2027 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 NCANO14594 1321 aa20.73■□□□□ 0.91
GGPS1-206ENST00000488594 DCDC2BA2VCK2 349 aa20.72■□□□□ 0.91
GGPS1-206ENST00000488594 FOXD2O60548 495 aaPredicted RBP20.72■□□□□ 0.91
GGPS1-206ENST00000488594 PAX3P23760 479 aa20.72■□□□□ 0.91
GGPS1-206ENST00000488594 PPP2R3AQ06190 1150 aa20.72■□□□□ 0.91
GGPS1-206ENST00000488594 DUSP4Q13115 394 aa20.72■□□□□ 0.91
GGPS1-206ENST00000488594 MYBPC2Q14324 1141 aa20.72■□□□□ 0.91
GGPS1-206ENST00000488594 GAS6Q14393 721 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms