RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 P3H1Q32P28 736 aa16.07■□□□□ 0.16
PKD1-220ENST00000487932 CARNMT1Q8N4J0 409 aa16.07■□□□□ 0.16
PKD1-220ENST00000487932 DCP1AQ9NPI6 582 aaPredicted RBP16.07■□□□□ 0.16
PKD1-220ENST00000487932 MYL2P10916 166 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 HPGDP15428 266 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 TRIM32Q13049 653 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 EFCAB12Q6NXP0 572 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 C16orf62Q7Z3J2 963 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 PHACTR4Q8IZ21 702 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 PRMT1Q99873 361 aaKnown RBP16.06■□□□□ 0.16
PKD1-220ENST00000487932 COPS7BQ9H9Q2 264 aaPredicted RBP16.06■□□□□ 0.16
PKD1-220ENST00000487932 ETNK1Q9HBU6 452 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 RASSF10A6NK89 507 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 NBPF26B4DH59 902 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 PSMD3O43242 534 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 SKAP2O75563 359 aaPredicted RBP16.06■□□□□ 0.16
PKD1-220ENST00000487932 CHI3L1P36222 383 aaPredicted RBP16.06■□□□□ 0.16
PKD1-220ENST00000487932 AP3M2P53677 418 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 PPP2R2AP63151 447 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 HIC1Q14526 733 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 BBS7Q8IWZ6 715 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 HPS3Q969F9 1004 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 OSBPL1AQ9BXW6 950 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 EMBQ6PCB8 327 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 DTX3LQ8TDB6 740 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 NPHP4O75161 1426 aaPredicted RBP16.06■□□□□ 0.16
PKD1-220ENST00000487932 MYO1CO00159 1063 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 ZNF500O60304 480 aaPredicted RBP16.06■□□□□ 0.16
PKD1-220ENST00000487932 SRP72O76094 671 aaKnown RBP16.06■□□□□ 0.16
PKD1-220ENST00000487932 YY1P25490 414 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 PTPN7P35236 360 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 PLA2G4FQ68DD2 849 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 LRRC8BQ6P9F7 803 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 CATSPERBQ9H7T0 1116 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 FHOD1Q9Y613 1164 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 CPDO75976 1380 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 S100A5P33763 92 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 SERPINB4P48594 390 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 CCDC15Q0P6D6 951 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 SMTNL2Q2TAL5 461 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 SV2CQ496J9 727 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 GALNT4Q8N4A0 578 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 RPS6KB2Q9UBS0 482 aa16.06■□□□□ 0.16
PKD1-220ENST00000487932 CHUKO15111 745 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 CCDC22O60826 627 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 CLASP2O75122 1294 aaKnown RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 RD3Q7Z3Z2 195 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 KRT77Q7Z794 578 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 TADA1Q96BN2 335 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 MRPL1Q9BYD6 325 aaKnown RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 OSGEPL1Q9H4B0 414 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 NPHS2Q9NP85 383 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 APPL1Q9UKG1 709 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 HNRNPCP07910 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
PKD1-220ENST00000487932 CYP2C9P11712 490 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 PLA2G4AP47712 749 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 CCDC81Q6ZN84 652 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 DHX40Q8IX18 779 aaKnown RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 TMEM117Q9H0C3 514 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 AAASQ9NRG9 546 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 GGA3Q9NZ52 723 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 CYP7B1O75881 506 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 PGM1P36871 562 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 NCOA4Q13772 614 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 PPP1R18Q6NYC8 613 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 SHCBP1LQ9BZQ2 653 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 WWOXQ9NZC7 414 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 AIM2O14862 343 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 ASS1P00966 412 aaKnown RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 MBL2P11226 248 aaPredicted RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 SERPINB10P48595 397 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 CNGA3Q16281 694 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 CLEC4GQ6UXB4 293 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 ZNF438Q7Z4V0 828 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 YME1L1Q96TA2 773 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 ABCC2Q92887 1545 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 WEE2P0C1S8 567 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 ACTN3Q08043 901 aaPredicted RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 TMEM132BQ14DG7 1078 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 TRADDQ15628 312 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 SHROOM1Q2M3G4 852 aaPredicted RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 RNF180Q86T96 592 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 NT5DC4Q86YG4 428 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 VPS50Q96JG6 964 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 BARHL2Q9NY43 387 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 UTP6Q9NYH9 597 aaKnown RBP16.05■□□□□ 0.16
PKD1-220ENST00000487932 EHD2Q9NZN4 543 aa16.05■□□□□ 0.16
PKD1-220ENST00000487932 ATP8B1O43520 1251 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 GPC1P35052 558 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 FAM136AQ96C01 138 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 DEPDC7Q96QD5 511 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 GOLPH3LQ9H4A5 285 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 PPIEQ9UNP9 301 aaKnown RBP16.04■□□□□ 0.16
PKD1-220ENST00000487932 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
PKD1-220ENST00000487932 NUP153P49790 1475 aaKnown RBP16.04■□□□□ 0.16
PKD1-220ENST00000487932 AATKQ6ZMQ8 1374 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 DNAJB2P25686 324 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 PSMA3P25788 255 aa16.04■□□□□ 0.16
PKD1-220ENST00000487932 CYP4A22Q5TCH4 519 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms