RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TEX35Q5T0J7 233 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 TAF3Q5VWG9 929 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 CCDC70Q6NSX1 233 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 DAAM2Q86T65 1068 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 BEST2Q8NFU1 509 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF606Q8WXB4 792 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 ARHGEF26Q96DR7 871 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 PPP1R16BQ96T49 567 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 TRAIPQ9BWF2 469 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 LHX5Q9H2C1 402 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 CDHR5Q9HBB8 845 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 DPP3Q9NY33 737 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 CTTNBP2NLQ9P2B4 639 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 DDX20Q9UHI6 824 aaKnown RBP12.42□□□□□ -0.42
PRKCB-207ENST00000486868 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
PRKCB-207ENST00000486868 UBQLN1Q9UMX0 589 aaKnown RBP12.42□□□□□ -0.42
PRKCB-207ENST00000486868 UMODL1Q5DID0 1318 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 MOXD2PA6NHM9 499 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 MGAMO43451 1857 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 ATP8B1O43520 1251 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 SRGAP2O75044 1071 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 FTCDO95954 541 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 PGK1P00558 417 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 ATF7P17544 494 aaPredicted RBP12.41□□□□□ -0.42
PRKCB-207ENST00000486868 ABCB4P21439 1286 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 SLC1A1P43005 524 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 NSFP46459 744 aaKnown RBP12.41□□□□□ -0.42
PRKCB-207ENST00000486868 NOMO3P69849 1222 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 IRX5P78411 483 aaPredicted RBP12.41□□□□□ -0.42
PRKCB-207ENST00000486868 INCA1Q0VD86 236 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 MYO1EQ12965 1108 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 NAA30Q147X3 362 aaPredicted RBP12.41□□□□□ -0.42
PRKCB-207ENST00000486868 STILQ15468 1287 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 CCDC181Q5TID7 509 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 LIN9Q5TKA1 542 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 CXCL17Q6UXB2 119 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 MON1BQ7L1V2 547 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 RNF180Q86T96 592 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 HACE1Q8IYU2 909 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 COG1Q8WTW3 980 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 TSC1Q92574 1164 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 EVPLQ92817 2033 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF653Q96CK0 615 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 KIF12Q96FN5 646 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 FAM84AQ96KN4 292 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 TRIM6Q9C030 488 aaPredicted RBP12.41□□□□□ -0.42
PRKCB-207ENST00000486868 WNT8AQ9H1J5 351 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 CARD9Q9H257 536 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 MRPL47Q9HD33 250 aaKnown RBP12.41□□□□□ -0.42
PRKCB-207ENST00000486868 OSGEPQ9NPF4 335 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.41□□□□□ -0.422e-7■■■■■ 73.3
PRKCB-207ENST00000486868 SCN10AQ9Y5Y9 1956 aa12.41□□□□□ -0.42
PRKCB-207ENST00000486868 CCDC151A5D8V7 595 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 TULP1O00294 542 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 PDE2AO00408 941 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 THAP12O43422 761 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 CILPO75339 1184 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 ECM2O94769 699 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 ITGB3P05106 788 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 CALB1P05937 261 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 ASGR1P07306 291 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 CTNNA2P26232 953 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 PNPLA4P41247 253 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 GSCP56915 257 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF200P98182 395 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 MGAT3Q09327 533 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 PTK7Q13308 1070 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 KCNA10Q16322 511 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 PPP2R5EQ16537 467 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 WDR72Q3MJ13 1102 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 FAM26DQ5JW98 314 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 UBXN11Q5T124 520 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 PLEKHA7Q6IQ23 1121 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 GDF6Q6KF10 455 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 WDR93Q6P2C0 686 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 USP38Q8NB14 1042 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 TMEM35BQ8NCS4 154 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 SLAIN1Q8ND83 568 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 SPATA4Q8NEY3 305 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF564Q8TBZ8 553 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 HNRNPLLQ8WVV9 542 aaKnown RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 TMEM40Q8WWA1 233 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 HPDLQ96IR7 371 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 NAP1L3Q99457 506 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 EIF2AQ9BY44 585 aaKnown RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 SENP6Q9GZR1 1112 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 PDCL3Q9H2J4 239 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 ACP6Q9NPH0 428 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 SNTG2Q9NY99 539 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 CNOT8Q9UFF9 292 aaKnown RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 TMEM59LQ9UK28 342 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 BARX2Q9UMQ3 279 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 COG5Q9UP83 839 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
PRKCB-207ENST00000486868 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.42
PRKCB-207ENST00000486868 CEP83Q9Y592 693 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms