RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CRELD1Q96HD1 420 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 TRIM6Q9C030 488 aaPredicted RBP10.81□□□□□ -0.68
SND1-213ENST00000486037 ZMYND12Q9H0C1 365 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 ZSCAN16Q9H4T2 348 aaPredicted RBP10.81□□□□□ -0.68
SND1-213ENST00000486037 C8orf33Q9H7E9 229 aaPredicted RBP10.81□□□□□ -0.68
SND1-213ENST00000486037 CEP72Q9P209 647 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 ANKFY1Q9P2R3 1169 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 INVSQ9Y283 1065 aa10.81□□□□□ -0.68
SND1-213ENST00000486037 FAM221BA6H8Z2 402 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 TTLL13PA6NNM8 815 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 hCG_1984214I3L0E3 225 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 INO80B-WBP1J3KQ70 363 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 ZBTB39O15060 712 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 CHADO15335 359 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 MEFVO15553 781 aaPredicted RBP10.8□□□□□ -0.68
SND1-213ENST00000486037 AKAP3O75969 853 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 C1QL1O75973 258 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 MICAL2O94851 1124 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 ABLIM3O94929 683 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 PRKCBP05771 671 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 MYL4P12829 197 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 AXLP30530 894 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 BRCC3P46736 316 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 IRX4P78413 519 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 SPIRE1Q08AE8 756 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 FCHO2Q0JRZ9 810 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 EMC2Q15006 297 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 DIS3L2Q8IYB7 885 aaKnown RBP10.8□□□□□ -0.68
SND1-213ENST00000486037 REXO1Q8N1G1 1221 aaKnown RBP10.8□□□□□ -0.68
SND1-213ENST00000486037 ZNF713Q8N859 430 aaPredicted RBP10.8□□□□□ -0.68
SND1-213ENST00000486037 C3orf58Q8NDZ4 430 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 SHKBP1Q8TBC3 707 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 OXER1Q8TDS5 423 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 ASAP3Q8TDY4 903 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 SLC7A3Q8WY07 619 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 MSANTD3Q96H12 275 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 LRIG1Q96JA1 1093 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 CEP170P1Q96L14 293 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 JPH2Q9BR39 696 aaPredicted RBP10.8□□□□□ -0.68
SND1-213ENST00000486037 GLT8D2Q9H1C3 349 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 XPNPEP1Q9NQW7 623 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 ATP6V1DQ9Y5K8 247 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 INSL5Q9Y5Q6 135 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 ACACAQ13085 2346 aa10.8□□□□□ -0.68
SND1-213ENST00000486037 ESYT2A0FGR8 921 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 BTBD18B2RXH4 712 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 PRRG1O14668 218 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 ZNF197O14709 1029 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 TDP2O95551 362 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 XBP1P17861 261 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 U2AF2P26368 475 aaKnown RBP eCLIP10.79□□□□□ -0.687e-7■■□□□ 12.2
SND1-213ENST00000486037 ARPP19P56211 112 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 PSMC5P62195 406 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 SIM1P81133 766 aaPredicted RBP10.79□□□□□ -0.68
SND1-213ENST00000486037 NR5A1Q13285 461 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 CAPSQ13938 189 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 NBR1Q14596 966 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 NAIF1Q69YI7 327 aaPredicted RBP10.79□□□□□ -0.68
SND1-213ENST00000486037 FSTL4Q6MZW2 842 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 PDXDC1Q6P996 788 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 RTL10Q7L3V2 364 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 BRAPQ7Z569 592 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
SND1-213ENST00000486037 YAF2Q8IY57 180 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 ZNF461Q8TAF7 563 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 CYP4F11Q9HBI6 524 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 GOLGA2P5Q9HBQ8 144 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 GDPD2Q9HCC8 539 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 SH3GLB2Q9NR46 395 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 LMBRD1Q9NUN5 540 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 TFIP11Q9UBB9 837 aaKnown RBP10.79□□□□□ -0.68
SND1-213ENST00000486037 SLC8A2Q9UPR5 921 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 BACE2Q9Y5Z0 518 aa10.79□□□□□ -0.68
SND1-213ENST00000486037 PLXNB3Q9ULL4 1909 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 KHNYNO15037 678 aaKnown RBP10.78□□□□□ -0.68
SND1-213ENST00000486037 BCKDHBP21953 392 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 KRT2P35908 639 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 EPHA5P54756 1037 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 NLRP5P59047 1200 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
SND1-213ENST00000486037 TWF1Q12792 350 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 ELAVL2Q12926 359 aaKnown RBP10.78□□□□□ -0.68
SND1-213ENST00000486037 SAFBQ15424 915 aaKnown RBP eCLIP10.78□□□□□ -0.685e-7■□□□□ 9.9
SND1-213ENST00000486037 ELF2Q15723 593 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 SLC8B1Q6J4K2 584 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 SLC27A1Q6PCB7 646 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 PIP4P1Q86T03 277 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 SYNPOQ8N3V7 929 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 ETNPPLQ8TBG4 499 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 MDM1Q8TC05 714 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 TNFRSF25Q93038 417 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 USP28Q96RU2 1077 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 MKNK1Q9BUB5 465 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 LRRC3Q9BY71 257 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 FOXP1Q9H334 677 aaPredicted RBP10.78□□□□□ -0.68
SND1-213ENST00000486037 SLITRK6Q9H5Y7 841 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 FBRSL1Q9HCM7 1045 aaKnown RBP10.78□□□□□ -0.68
SND1-213ENST00000486037 FSCN3Q9NQT6 498 aa10.78□□□□□ -0.68
SND1-213ENST00000486037 USP20Q9Y2K6 914 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms