RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PCDHGA4Q9Y5G9 962 aa5.77□□□□□ -1.49
CCDC39-205ENST00000485055 TNPO3Q9Y5L0 923 aaKnown RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 EPN1Q9Y6I3 576 aaPredicted RBP5.77□□□□□ -1.49
CCDC39-205ENST00000485055 CCDC196A0A1B0GTZ2 297 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 C2orf81A6NN90 581 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NCK2O43639 380 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 DOK2O60496 412 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 DKC1O60832 514 aaKnown RBP eCLIP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 PPM1AP35813 382 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 USP4Q13107 963 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 PWP1Q13610 501 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NLRX1Q86UT6 975 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NLRP8Q86W28 1048 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 EPHX4Q8IUS5 362 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 PPM1KQ8N3J5 372 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 SRBD1Q8N5C6 995 aaKnown RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 TNPO1Q92973 898 aaKnown RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 HSPBAP1Q96EW2 488 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF274Q96GC6 653 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 C1orf74Q96LT6 269 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 RIPOR3Q96MK2 946 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NT5C1BQ96P26 610 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 GPR20Q99678 358 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 C7orf25Q9BPX7 421 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 RC3H2Q9HBD1 1191 aaKnown RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 BARHL2Q9NY43 387 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 TRIP12Q14669 1992 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NRCAMQ92823 1304 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 PTPDC1A2A3K4 754 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 AKR1B15C9JRZ8 316 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 MEIS1O00470 390 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 C1RP00736 705 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 APOA4P06727 396 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 CELA3AP09093 270 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 JMJD7P0C870 316 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 GNAT1P11488 350 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 KRT9P35527 623 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 DCAF7P61962 342 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NTRK3Q16288 839 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 ARHGEF16Q5VV41 709 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 APOA5Q6Q788 366 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NSMFQ6X4W1 530 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 DEFB123Q8N688 67 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 CTCFLQ8NI51 663 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 UTP15Q8TED0 518 aaKnown RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 ANKRD49Q8WVL7 239 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 HPS3Q969F9 1004 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 ZDHHC16Q969W1 377 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 LRCH3Q96II8 777 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NEK1Q96PY6 1258 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 PIGSQ96S52 555 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 NTPCRQ9BSD7 190 aaKnown RBP5.76□□□□□ -1.49
CCDC39-205ENST00000485055 AASSQ9UDR5 926 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 LAMP5Q9UJQ1 280 aa5.76□□□□□ -1.49
CCDC39-205ENST00000485055 DGKIO75912 1065 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 MX2P20592 715 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 UBA1P22314 1058 aaKnown RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 TPD52P55327 224 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 RAB15P59190 212 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 ERVK-21P61565 698 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 SLC7A5Q01650 507 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 GRM2Q14416 872 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 PFKFB3Q16875 520 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 INAVAQ3KP66 663 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 CXCL17Q6UXB2 119 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 KDELC2Q7Z4H8 507 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 OR2C3Q8N628 320 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 LINC01465Q8N7H1 131 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 TBC1D5Q92609 795 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 USP7Q93009 1102 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 CDX2Q99626 313 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 RNF26Q9BY78 433 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 DNAI2Q9GZS0 605 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 C6orf203Q9P0P8 240 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 ZNF232Q9UNY5 417 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 V9GYY5 206 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 MYH9P35579 1960 aaKnown RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 KAT6AQ92794 2004 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 SLC7A4O43246 635 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHGA12O60330 932 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 F13A1P00488 732 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 GZMAP12544 262 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 SYN1P17600 705 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 USP11P51784 963 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 AKAP17AQ02040 695 aaKnown RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 SP2Q02086 613 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 CLCQ05315 142 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 IKQ13123 557 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 SPARCL1Q14515 664 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 FNDC3BQ53EP0 1204 aaKnown RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 TAF2Q6P1X5 1199 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 TMEM151BQ8IW70 566 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 LENG1Q96BZ8 264 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 MXRA8Q9BRK3 442 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 ARHGAP9Q9BRR9 750 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 GRHPRQ9UBQ7 328 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 ZMAT5Q9UDW3 170 aaKnown RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 LRCH1Q9Y2L9 728 aa5.75□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHGA9Q9Y5G4 932 aaKnown RBP5.75□□□□□ -1.49
CCDC39-205ENST00000485055 PCDHGA8Q9Y5G5 932 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms